Dinoroseobacter shibae DFL 12 |
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Putative Dinoroseobacter shibae DFL 12 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10360
Complete sequence: 3,789,584 bp
GenBank #: CP000830 (NC_009952)
REBASE acronym: Dsh12
Org_num: 4921
All begin Dshi_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1916 | 243 aa hypothetical protein | |||
| 1917 | M | M1.Dsh36ORF9925P (92% identity) | GACGGC | M1.Dsh12II |
| 1918 | M | M2.Dsh36ORF9925P (95% identity) | GACGGC | M2.Dsh12II |
| 1919 | 576 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2100 | integrase | |||
| 2101 | R | Dsh36ORF10880P (100% identity) | Dsh12ORF2102P | |
| 2102 | M | M.Dsh36ORF10880BP (97% identity) | M.Dsh12ORF2102AP | |
| 2103 | transposase | |||
| 2104 | integrase | |||
| 2105 | M | M.Dsh36ORF10880AP (100% identity) | M.Dsh12ORF2102BP | |
| 2106 | C | C.Dsh36ORF10880P (100% identity) | C.Dsh12ORF2102P | |
| 2107 | 232 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23 | ribonuclease HII | |||
| 24 | M | M.Dsh36ORF120P (100% identity) | GANTC | M.Dsh12I |
| 25 | transcriptional activator anti-ECFsigma factor | |||