Lactobacillus casei W56 |
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Putative Lactobacillus casei W56 RM systems
Ref: Hochwind,K. et al. unpublished
REBASE ref # 14976
| Sequence length: | GenBank #: | |
| Chromosome: | 3,075,780 bp | HE970764 |
| plasmid pW56: | 56,316 bp | HE970765 |
REBASE acronym: LcaW56
Org_num: 9407
All begin BN194_, BN194_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22290 | uncharacterized protein | |||
| 22300 | S | S3.Lpa080ORF4750P (100% identity) | S1.LcaW56ORFAP | |
| 22310 | Type I restriction modification DNA specificity | |||
| 22320 | S | S2.LpaTCSORFBP (36% identity) | S2.LcaW56ORFAP | |
| 22330 | S | S1.Lpa080ORF4750P (90% identity) | S3.LcaW56ORFAP | |
| ??? | M | M.LpaTCSORFBP (100% identity) | M.LcaW56ORFAP | |
| 22350 | R | LpaTCSORFBP (100% identity) | LcaW56ORFAP | |
| 22360 | uncharacterized protein | |||
| plasmid pW56 | ||||
| 310 | Transposase | |||
| 320 | S | S.Lrh3698ORF9650P (100% identity) | S.LcaW56ORF330P | |
| 330 | M | M.LpaTCSORFAP (100% identity) | M.LcaW56ORF330P | |
| 340 | R | LpaTCSORFAP (85% identity) | LcaW56ORF330P | |
| 350 | uncharacterized protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22280 | uncharacterized protein | |||
| 22290 | R | LpaM56GmrSDP (100% identity) | LcaW56GmrSDP | |
| 22300 | HsdS | |||