Brachyspira pilosicoli B2904 |
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Putative Brachyspira pilosicoli B2904 RM systems
Ref: Mappley,L.J. et al. BMC Genomics 13 (1), 454 (2012)
REBASE ref # 14972
Complete sequence: 2,765,477 bp
GenBank #: CP003490
REBASE acronym: Bpi2904
Org_num: 9401
All begin B2904_orf
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1467 | 184 aa hypothetical protein | |||
| ??? | R | BpiWesBORF1183P (97% identity) | Bpi2904ORF1471P | |
| 1470 | S | S.Bpi2904ORF2558P (63% identity) | S.Bpi2904ORF1471P | |
| 1471 | M | M.BpiWesBORF1183P (99% identity) | M.Bpi2904ORF1471P | |
| 1472 | rhodanese-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | adenylosuccinate synthase | |||
| 392 | M | M.Bpi1244ORF9510P (97% identity) | CCWGG | M.Bpi2904ORF392P |
| 393 | ATP-dependent protease La | |||
| 579 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase | |||
| ??? | M | M.BpiWesBORF610P (99% identity) | GCATC | M.Bpi2904ORF580P |
| 582 | R | BpiWesBORF610P (99% identity) | Bpi2904ORF580P | |
| 583 | adenine deaminase | |||
| 813 | 230 aa hypothetical protein | |||
| 814 | RM | Bpi13046ORF42P (86% identity) | Bpi2904ORF814P | |
| 815 | 139 aa hypothetical protein | |||
| 1122 | thymidylate synthase | |||
| 1123 | M | modification methylase | GGNCC | M1.Bpi2904ORF1123P |
| 1124 | M | M.BpiWesBORF1242P (46% identity) | GGNCC | M2.Bpi2904ORF1123P |
| 1125 | R | BpiWesBORF1242P (100% identity) | GGNCC | Bpi2904ORF1123P |
| 1126 | dihydrofolate reductase | |||
| 1151 | GMP synthase [glutamine-hydrolyzing] | |||
| ??? | M | M.Bpi12874I (97% identity) | M.Bpi2904ORF1153P | |
| 1154 | GGDEF domain protein | |||
| 1358 | transposase | |||
| 1359 | R | Bpi13046ORF512P (98% identity) | CTGCAG | Bpi2904ORF1360P |
| 1360 | modification methylase BsuBI | |||
| 1967 | phage portal protein, HK97 family | |||
| 1968 | M | M.Bpi13046ORF740P (96% identity) | M.Bpi2904ORF1968P | |
| 1969 | phage terminase large subunit | |||
| 2044 | Aldose 1-epimerase | |||
| 2045 | M | M.Bpi1268ORF10895P (99% identity) | RAATTY | M.Bpi2904ORF2045P |
| 2046 | 180 aa hypothetical protein | |||
| 2430 | 3-oxoacyl-(acyl-carrier-protein) synthase III | |||
| 2431 | M | M.Bpi7141ORF7270P (100% identity) | M.Bpi2904ORF2431P | |
| 2432 | Yqi jprotein | |||
| 2557 | ATP-binding protein | |||
| 2558 | RM | BhaNSH16ORF8680P (80% identity) | Bpi2904ORF2558P | |
| 2559 | 172 aa hypothetical protein | |||
| 2560 | S | S.Bpi2904ORF1471P (63% identity) | S.Bpi2904ORF2558P | |
| 2561 | treponemal membrane protein | |||
| 2692 | Hvp 32 VSH-1 tail protein | |||
| 2693 | R | Bpi1243ORF8495P (99% identity) | GATC | Bpi2904ORF2694P |
| 2694 | M | M.BpiWesBORF2650P (99% identity) | GATC | M.Bpi2904ORF2694P |
| 2695 | 533 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2551 | 136 aa hypothetical protein | |||
| 2552 | R | BhaNSH16McrB2P (77% identity) | Bpi2904McrBP | |
| 2553 | R | 5-methylcytosine restriction system component- | Bpi2904McrCP | |
| 2554 | serine threonine protein phosphatase | |||