Frankia species EAN1pec |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Frankia species EAN1pec RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10339
Complete sequence: 8,982,042 bp
GenBank #: CP000820 (NC_009921)
REBASE acronym: FspE
Org_num: 4878
All begin Franean1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2031 | 125 aa conserved hypothetical protein | |||
| 2033 | S | M.Ssp756ORF11725P (19% identity) | S.FspEORF2033P | |
| 2034 | protein of unknown function DUF1526 | |||
| 3766 | phosphoribosyltransferase | |||
| 3767 | M | M.Fsp16219ORF26385P (97% identity) | M.FspEORF3767P | |
| 3768 | S | S.Fsp16219ORF26385P (98% identity) | S.FspEORF3767P | |
| 3769 | 113 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 999 | Patatin | |||
| 1000 | M | M.Fsp16219ORF1460P (81% identity) | M.FspEORF1000P | |
| 1001 | 267 aa hypothetical protein | |||
| 1455 | 860 aa hypothetical protein | |||
| 1456 | M | M.UbaMDORFS3P (31% identity) | M.FspEORF1456P | |
| 1457 | integrase family protein | |||
| 5336 | R | Asp110486ORF12100P (62% identity) | CC | FspEI |
| 5337 | TIR protein | |||
| 5420 | helicase domain protein | |||
| 5421 | RM | Fsp16219ORF15060P (83% identity) | FspEORF5421P | |
| 6768 | phage-related protein | |||
| 6769 | RM | Fsp110501ORFCP (93% identity) | FspEORF6769P | |
| 6770 | helicase domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2348 | PilT protein domain protein | |||
| 2349 | R | Sfu3120MrrP (17% identity) | FspEMrrP | |
| 2350 | 179 aa hypothetical protein | |||
| 7062 | 162 aa conserved hypothetical protein | |||
| 7063 | R | Fsp12MrrP (62% identity) | FspEMrr2P | |
| 7064 | 97 aa hypothetical protein | |||