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Putative Lactobacillus mucosae LM1 RM systems
Ref: Lee,J.H. et al. J. Bacteriol. 194 (17), 4766 (2012)
REBASE ref # 14848
Sequence length: | GenBank #: | |
Chromosome: | 2,326,299 bp | CP011013 |
Chromosome: | 2,213,697 bp | AHIT00000000 (NZ_AHIT00000000) |
plasmid pLM1: | 108,311 bp | CP011014 |
REBASE acronym: LmuLM1
Org_num: 9270
All begin LBLM1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3850 | pseudogene | |||
3870 | R | LmuL1ORF6490P (99% identity) | LmuLM1ORF16140P | |
3875 | M | M.Leq162ORF5P (85% identity) | M.LmuLM1ORF16140P | |
3880 | S | S2.LmuL1ORF6490P (58% identity) | S1.LmuLM1ORF16140P | |
3885 | integrase | |||
3890 | S | S2.Lmu6426ORFDP (52% identity) | S2.LmuLM1ORF16140P | |
3895 | transposase | |||
Chromosome | ||||
16110 | S | S2.LmuL1ORF6490P (58% identity) | S1.LmuLM1ORF16140P | |
16120 | site-specific recombinase, phage integrase | |||
16130 | S | S2.Lmu6426ORFDP (52% identity) | S2.LmuLM1ORF16140P | |
16140 | M | M.Leq162ORF5P (85% identity) | M.LmuLM1ORF16140P | |
16150 | R | LmuL1ORF6490P (99% identity) | LmuLM1ORF16140P | |
20070 | 642 aa hypothetical protein | |||
20080 | R | LfrLF145ORF2315P (81% identity) | LmuLM1ORF20110P | |
20090 | S | S.RobA2ORF2270P (34% identity) | S1.LmuLM1ORF20110P | |
20100 | integrase family protein | |||
??? | S | S4.LreNS01ORFBP (31% identity) | S2.LmuLM1ORF20110P | |
??? | S | S.Lsu3549ORFCP (54% identity) | S3.LmuLM1ORF20110P | |
20110 | M | M.LreLB1ORF11730P (80% identity) | M.LmuLM1ORF20110P | |
20120 | 81 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5850 | integrase | |||
5855 | R | Lmu147ORF8710P (67% identity) | GGATG | LmuLM1ORF3920P |
??? | M | M.Lhe8105I (62% identity) | GGATG | M.LmuLM1ORF3920P |
5865 | 63 aa hypothetical protein | |||
Chromosome | ||||
3900 | integrase catalytic region | |||
3910 | R | Lmu147ORF8710P (67% identity) | GGATG | LmuLM1ORF3920P |
3920 | M | M.Lhe8105I (62% identity) | GGATG | M.LmuLM1ORF3920P |
3930 | 63 aa hypothetical protein | |||
19070 | 66 aa hypothetical protein | |||
19080 | M | M.Sdy11557ORF742P (52% identity) | M.LmuLM1ORF19080P | |
19090 | 47 aa hypothetical protein | |||
plasmid pLM1 | ||||
11330 | 131 aa hypothetical protein | |||
11335 | M | M.Sdy11557ORF742P (52% identity) | M.LmuLM1ORF19080P | |
11340 | 86 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
7100 | 560 aa hypothetical protein | |||
7105 | M | M.Lre8605ORF10160P (71% identity) | M.LmuLM1ORF6630P | |
7110 | R | LmuLM011ORF7030P (87% identity) | LmuLM1ORF6630P | |
7115 | 429 aa hypothetical protein | |||
Chromosome | ||||
6610 | 429 aa hypothetical protein | |||
6620 | R | LmuLM011ORF7030P (87% identity) | LmuLM1ORF6630P | |
6630 | M | M.Lre8605ORF10160P (71% identity) | M.LmuLM1ORF6630P | |
6640 | 560 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1095 | penicillin-binding protein | |||
1100 | R | LmuLM1ORF15840P (98% identity) | LmuLM1ORF1100P | |
1105 | 217 aa hypothetical protein | |||
1735 | RNA methyltransferase | |||
??? | R | LspP38MrrP (91% identity) | LmuLM1MrrP | |
1745 | pseudogene | |||
4705 | 7,8-dihydro-8-oxoguanine-triphosphatase | |||
4710 | R | LmuMORFCP (97% identity) | LmuLM1ORF18190P | |
4715 | 269 aa hypothetical protein | |||
Chromosome | ||||
14600 | D-3-phosphoglycerate dehydrogenase | |||
14610 | R | LspP38MrrP (91% identity) | LmuLM1MrrP | |
14620 | RNA methyltransferase | |||
15830 | 217 aa hypothetical protein | |||
15840 | R | LmuLM011ORF2675P (99% identity) | LmuLM1ORF15840P | |
15850 | penicillin-binding protein | |||
18180 | mutator MutT protein | |||
18190 | R | LmuMORFCP (97% identity) | LmuLM1ORF18190P | |
18200 | 277 aa hypothetical protein |