Ref: Lee,J.H. et al. J. Bacteriol. 194 (17), 4766 (2012)

REBASE ref # 14848

Sequence length:GenBank #:
Chromosome: 2,326,299 bp CP011013
Chromosome: 2,213,697 bp AHIT00000000 (NZ_AHIT00000000)
plasmid pLM1: 108,311 bp CP011014

REBASE acronym: LmuLM1

Org_num: 9270

 

All begin LBLM1_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3850 pseudogene
3870 R LmuL1ORF6490P (99% identity) LmuLM1ORF16140P
3875 M M.Leq162ORF5P (85% identity) M.LmuLM1ORF16140P
3880 S S2.LmuL1ORF6490P (58% identity) S1.LmuLM1ORF16140P
3885 integrase
3890 S S2.Lmu6426ORFDP (52% identity) S2.LmuLM1ORF16140P
3895 transposase
 
Chromosome
 
16110 S S2.LmuL1ORF6490P (58% identity) S1.LmuLM1ORF16140P
16120 site-specific recombinase, phage integrase
16130 S S2.Lmu6426ORFDP (52% identity) S2.LmuLM1ORF16140P
16140 M M.Leq162ORF5P (85% identity) M.LmuLM1ORF16140P
16150 R LmuL1ORF6490P (99% identity) LmuLM1ORF16140P
 
20070 642 aa hypothetical protein
20080 R LfrLF145ORF2315P (81% identity) LmuLM1ORF20110P
20090 S S.RobA2ORF2270P (34% identity) S1.LmuLM1ORF20110P
20100 integrase family protein
??? S S4.LreNS01ORFBP (31% identity) S2.LmuLM1ORF20110P
??? S S.Lsu3549ORFCP (54% identity) S3.LmuLM1ORF20110P
20110 M M.LreLB1ORF11730P (80% identity) M.LmuLM1ORF20110P
20120 81 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
5850 integrase
5855 R Lmu147ORF8710P (67% identity) GGATG LmuLM1ORF3920P
??? M M.Lhe8105I (62% identity) GGATG M.LmuLM1ORF3920P
5865 63 aa hypothetical protein
 
Chromosome
 
3900 integrase catalytic region
3910 R Lmu147ORF8710P (67% identity) GGATG LmuLM1ORF3920P
3920 M M.Lhe8105I (62% identity) GGATG M.LmuLM1ORF3920P
3930 63 aa hypothetical protein
 
19070 66 aa hypothetical protein
19080 M M.Sdy11557ORF742P (52% identity) M.LmuLM1ORF19080P
19090 47 aa hypothetical protein
 
plasmid pLM1
 
11330 131 aa hypothetical protein
11335 M M.Sdy11557ORF742P (52% identity) M.LmuLM1ORF19080P
11340 86 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
7100 560 aa hypothetical protein
7105 M M.Lre8605ORF10160P (71% identity) M.LmuLM1ORF6630P
7110 R LmuLM011ORF7030P (87% identity) LmuLM1ORF6630P
7115 429 aa hypothetical protein
 
Chromosome
 
6610 429 aa hypothetical protein
6620 R LmuLM011ORF7030P (87% identity) LmuLM1ORF6630P
6630 M M.Lre8605ORF10160P (71% identity) M.LmuLM1ORF6630P
6640 560 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1095 penicillin-binding protein
1100 R LmuLM1ORF15840P (98% identity) LmuLM1ORF1100P
1105 217 aa hypothetical protein
 
1735 RNA methyltransferase
??? R LspP38MrrP (91% identity) LmuLM1MrrP
1745 pseudogene
 
4705 7,8-dihydro-8-oxoguanine-triphosphatase
4710 R LmuMORFCP (97% identity) LmuLM1ORF18190P
4715 269 aa hypothetical protein
 
Chromosome
 
14600 D-3-phosphoglycerate dehydrogenase
14610 R LspP38MrrP (91% identity) LmuLM1MrrP
14620 RNA methyltransferase
 
15830 217 aa hypothetical protein
15840 R LmuLM011ORF2675P (99% identity) LmuLM1ORF15840P
15850 penicillin-binding protein
 
18180 mutator MutT protein
18190 R LmuMORFCP (97% identity) LmuLM1ORF18190P
18200 277 aa hypothetical protein
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