Vibrio breoganii 1C-10 |
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Putative Vibrio breoganii 1C-10 RM systems
Ref: Timberlake,S. unpublished
REBASE ref # 14708
Contig set: 4,146,124 bp
GenBank #: AKXW00000000
REBASE acronym: Vbr
Org_num: 8718
All begin B003_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16125 | 103 aa hypothetical protein | |||
| 16130 | M | M.Vbr29ORFCP (96% identity) | TTAYNNNNNNCTAG | M.VbrII |
| ??? | S | S.Val64140ORF1695P (87% identity) | TTAYNNNNNNCTAG | S.VbrII |
| 16140 | 613 aa hypothetical protein | |||
| 16145 | R | Vbr29ORFCP (98% identity) | TTAYNNNNNNCTAG | VbrIIP |
| 16150 | 119 aa hypothetical protein | |||
| 730 | metal-dependent hydrolase | |||
| 735 | R | VspJ16AORF632P (85% identity) | GTCANNNNNNNTDCT | VbrIP |
| 740 | 377 aa hypothetical protein | |||
| 745 | S | S.Pda91197ORF103P (56% identity) | GTCANNNNNNNTDCT | S.VbrI |
| 750 | M | M.VleF7V (94% identity) | GTCANNNNNNNTDCT | M.VbrI |
| 755 | transcriptional regulator | |||
| ??? | M | M.Vbr29ORFCP (96% identity) | TTAYNNNNNNCTAG | M.VbrII |
| ??? | S | S.Val64140ORF1695P (87% identity) | TTAYNNNNNNCTAG | S.VbrII |
| ??? | R | Vbr29ORFCP (98% identity) | TTAYNNNNNNCTAG | VbrIIP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8215 | ribulose-phosphate 3-epimerase | |||
| 8220 | M | M.Vbr1829ORFAP (100% identity) | GATC | M.VbrDam |
| 8225 | 473 aa hypothetical protein | |||
| 11690 | 308 aa hypothetical protein | |||
| 11695 | M | M.Vbr29SspAP (100% identity) | M.VbrSspAP | |
| 11700 | 420 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18240 | 242 aa hypothetical protein | |||
| 18245 | R | Vbr29McrBP (100% identity) | VbrMcrBP | |
| 18250 | integrase | |||