Propionibacterium propionicum F0230a |
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Putative Propionibacterium propionicum F0230a RM systems
Ref: Durkin,A.S. et al. unpublished
REBASE ref # 13964
Complete sequence: 3,449,360 bp
GenBank #: CP002734
REBASE acronym: Ppr230
Org_num: 9100
All begin HMPREF9154_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2899 | divergent AAA domain protein | |||
| 2900 | M | M.Ppr700I (100% identity) | CAGNNNNNCTGG | M.Ppr230ORF2900P |
| 2901 | toxin-antitoxin system, toxin component, Fic | |||
| 2902 | S | S.Ppr700I (100% identity) | CAGNNNNNCTGG | S.Ppr230ORF2900P |
| 2903 | restriction endonuclease | |||
| 2904 | R | Ppr700IP (100% identity) | CAGNNNNNCTGG | Ppr230ORF2900P |
| 2905 | DNA binding domain protein, excisionase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 885 | 158 aa hypothetical protein | |||
| 886 | R | Ppr700ORF4235P (100% identity) | CC | Ppr230ORF886P |
| 887 | 302 aa hypothetical protein | |||
| 1812 | 367 aa hypothetical protein | |||
| 1813 | M | M.Ppr700ORF8760P (100% identity) | M.Ppr230ORF1813P | |
| 1814 | type III restriction enzyme, res subunit | |||
| 2585 | 68 aa hypothetical protein | |||
| ??? | M | M.Ppr230bORFBP (100% identity) | M.Ppr230ORFBP | |
| 2586 | 256 aa hypothetical protein | |||
| 2667 | transposase, IS4 family | |||
| 2668 | R | Ppr700IIP (100% identity) | Ppr230ORF2669P | |
| 2669 | M | M.Ppr230bII (100% identity) | M.Ppr230ORF2669P | |
| 2670 | recombinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | glycosyl hydrolase family 16 | |||
| 3011 | R | Ppr230bORFDP (93% identity) | Ppr230ORF3013P | |
| 3012 | divergent AAA domain protein | |||
| 3013 | M | M.Ppr700ORF14545P (100% identity) | M.Ppr230ORF3013P | |
| 3014 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 453 | serine dehydrogenase proteinase domain protein | |||
| 454 | R | Ppr700McrBP (96% identity) | Ppr230McrBP | |
| 455 | R | Ppr230bMcrCP (100% identity) | Ppr230McrCP | |
| 456 | membrane protein | |||
| 719 | TOBE domain protein | |||
| 720 | R | Ppr700MrrP (100% identity) | Ppr230Mrr2P | |
| 721 | SNARE-like domain protein | |||
| 2902 | type I restriction modification DNA specificity | |||
| 2903 | R | Ppr700Mrr2P (100% identity) | Ppr230MrrP | |
| 2904 | type I site-specific deoxyribonuclease, HsdR | |||