Escherichia coli DEC12B |
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Putative Escherichia coli DEC12B RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIHB00000000
REBASE acronym: EcoDEC12B
Org_num: 9081
All begin ECDEC12B_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16 | 51 aa hypothetical protein | |||
| 17 | R | EcoS7380ORFEP (100% identity) | EcoDEC12BORF20P | |
| ??? | S | S.EcoDEC12EORF14P (100% identity) | S.EcoDEC12BORF20P | |
| 20 | M | M.SflN110ORF19045P (100% identity) | M.EcoDEC12BORF20P | |
| 21 | 277 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24 | mcrC | |||
| 25 | R | SflSTLE4ORF19250P (100% identity) | EcoDEC12BORF25P | |
| 26 | 40 aa hypothetical protein | |||
| 717 | 83 aa hypothetical protein | |||
| 718 | M | M.EcoSO40ORF27175P (100% identity) | GATC | M.EcoDEC12BORF718P |
| 719 | lexA DNA binding domain protein | |||
| 1020 | protein ninB | |||
| 1021 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.EcoDEC12BORF1021P |
| 1022 | bacteriophage Lambda NinG family protein | |||
| 1374 | 65 aa hypothetical protein | |||
| 1375 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoDEC12BORF1375P | |
| 1379 | 9-O-acetyl-N-acetylneuraminate esterase | |||
| 2505 | 65 aa hypothetical protein | |||
| 2506 | M | M.EcoS7438ORFNP (100% identity) | M.EcoDEC12BORF2506P | |
| 2509 | membrane protein | |||
| 2724 | carboxylate/Amino Acid/Amine Transporter family | |||
| 2725 | V | V.SflFF59DcmP (100% identity) | V.EcoDEC12BDcmP | |
| 2726 | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.EcoDEC12BDcmP |
| 2727 | HD domain protein | |||
| 2851 | endonuclease | |||
| 2852 | M | M.EcoE2863ORF2546P (100% identity) | GATC | M.EcoDEC12BORF2852P |
| 2853 | protein ninB | |||
| 3035 | 38 aa hypothetical protein | |||
| 3039 | M | M.EcoDEC12EORF951P (100% identity) | M.EcoDEC12BORF1375P | |
| 3040 | 65 aa hypothetical protein | |||
| 3583 | stationary phase translation inhibitor and | |||
| 3584 | M | M.EcoS6685ORFIP (100% identity) | M.EcoDEC12BORF3584P | |
| 3585 | 46 aa hypothetical protein | |||
| 3630 | nonspecific DNA binding protein | |||
| 3631 | M | M.EcoC6335ORF27970P (99% identity) | M.EcoDEC12BORF3631P | |
| 3633 | replicative DNA helicase | |||
| 4491 | fis transcriptional dual regulator | |||
| 4492 | M | M.EcoS7380ORFAP (100% identity) | ATGCAT | M.EcoDEC12BORF4492P |
| 4493 | 37 aa hypothetical protein | |||
| 4612 | ribulose-phosphate 3-epimerase | |||
| 4613 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC12BDamP |
| 4614 | cell division protein DamX | |||
| 5431 | 44 aa hypothetical protein | |||
| 5432 | M | M.EcoS7380ORFJP (100% identity) | GATC | M.EcoDEC12BORF5432P |
| 5433 | endodeoxyribonuclease RusA family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21 | 277 aa hypothetical protein | |||
| ??? | R | SflSTLE4McrBP (99% identity) | EcoDEC12BMcrBP | |
| 24 | R | SflSTLE4McrCP (100% identity) | EcoDEC12BMcrCP | |
| 25 | restriction endonuclease | |||