Escherichia coli HS |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli HS RM systems
Ref: Rasko,D.A. et al. unpublished
REBASE ref # 10280
Complete sequence: 4,643,538 bp
GenBank #: CP000802 (NC_009800)
REBASE acronym: EcoHS
Org_num: 4850
All begin EcHS_A
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 329 | site-specific recombinase, phage integrase | |||
| 330 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.EcoHSORF330P |
| 331 | membrane protein | |||
| 338 | 1213 aa conserved hypothetical protein | |||
| 339 | RM | Eco9086III (100% identity) | GGTAAG | EcoHSI |
| 340 | 865 aa conserved hypothetical protein | |||
| 916 | C4-type zinc finger protein, DksA/TraR family | |||
| 917 | M | M.EcosHSORF14470P (100% identity) | GATC | M.EcoHSORF917P |
| 918 | replication gene A protein | |||
| 2061 | carboxylate/amino acid/amine transporter | |||
| 2062 | V | V.SflSTLE1DcmP (100% identity) | V.EcoHSDcmP | |
| 2063 | M | M.EcosHSDcmP (100% identity) | CCWGG | M.EcoHSDcmP |
| 2064 | metal-dependent phosphohydrolase | |||
| 3454 | DNA-binding protein Fis | |||
| 3455 | M | M.EcosHSORF2250P (100% identity) | ATGCAT | M.EcoHSORF3455P |
| 3456 | 68 aa conserved hypothetical protein | |||
| 3582 | ribulose-phosphate 3-epimerase | |||
| 3583 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoHSDamP |
| 3584 | DamX protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4530 | ISEhe3, transposase orfA | |||
| 4531 | R | SflN101McrCP (58% identity) | EcoHSMcrCP | |
| 4532 | R | SflN101McrBP (100% identity) | EcoHSMcrBP | |
| 4533 | 290 aa conserved hypothetical protein | |||