Escherichia coli DEC7A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli DEC7A RM systems
Ref: Hazen,T.H. et al. J. Bacteriol. 194 (11), 3026-3027 (2012)
REBASE ref # 14514
GenBank #: AIGA00000000
REBASE acronym: EcoDEC7A
Org_num: 9053
All begin ECDEC7A_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5387 | membrane protein | |||
| 5388 | R | EcoR31ORF22360P (98% identity) | EcoDEC7AORF5391P | |
| 5389 | 39 aa hypothetical protein | |||
| 5390 | S | S.EcoR31ORF22360P (100% identity) | S.EcoDEC7AORF5391P | |
| 5391 | M | M.EcoR31ORF22360P (100% identity) | M.EcoDEC7AORF5391P | |
| 5392 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5162 | 41 aa hypothetical protein | |||
| 5163 | M | M.Ecocq9ORF29050P (100% identity) | M.EcoDEC7AORF5163P | |
| 5164 | yfcA protein | |||
| 5362 | recombination-associated protein rdgC | |||
| 5363 | M | M.EcoDEC7DORF464P (100% identity) | M.EcoDEC7AORF5363P | |
| 5364 | 50 aa hypothetical protein | |||
| 1290 | ybl17 | |||
| 1291 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC7AORF1291P |
| 1292 | exonuclease | |||
| 2166 | 306 aa hypothetical protein | |||
| 2167 | V | V.SflSTLE3DcmP (100% identity) | V.EcoDEC7ADcmP | |
| 2168 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoDEC7ADcmP |
| 2169 | 142 aa hypothetical protein | |||
| 3776 | DNA-binding protein fis | |||
| 3777 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoDEC7AORF3777P |
| 3778 | 37 aa hypothetical protein | |||
| 3912 | ribulose-phosphate 3-epimerase | |||
| 3913 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDEC7ADamP |
| 3914 | protein damX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1341 | membrane protein | |||
| 1342 | R | EcoteDMcrBP (92% identity) | EcoDEC7AMcrBP | |
| 1343 | R | EmaE2C08McrCP (93% identity) | EcoDEC7AMcrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2994 | bacteriophage replication protein | |||
| 2995 | M | M.EcoTX1999ORF3129P (100% identity) | GATC | M.EcoDEC7AORF2995P |
| 2996 | phage/conjugal plasmid C-4 type zinc finger, | |||