Desulfosporosinus acidiphilus SJ4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Desulfosporosinus acidiphilus SJ4 RM systems
Ref: Huntemann,M. et al. unpublished
REBASE ref # 14637
Complete sequence: 4,926,837 bp
GenBank #: CP003639
REBASE acronym: DacSJ4
Org_num: 8980
All begin Desaci_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1235 | 189 aa hypothetical protein | |||
| 1236 | M | M.Psp3P5ORF11915P (66% identity) | M.DacSJ4ORF1236P | |
| 1237 | S | S.Vch327278ORF1170P (58% identity) | S.DacSJ4ORF1236P | |
| 1238 | R | GspOR1ORF1398P (71% identity) | DacSJ4ORF1236P | |
| 1239 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1249 | 400 aa hypothetical protein | |||
| 1250 | R | DacM1ORF23120P (97% identity) | GGTACC | DacSJ4ORF1251P |
| 1251 | M | M.DacM1ORF23120P (95% identity) | GGTACC | M.DacSJ4ORF1251P |
| 1253 | 251 aa hypothetical protein | |||
| 1290 | 175 aa hypothetical protein | |||
| 1291 | M | M.DacM1ORF23400P (58% identity) | M.DacSJ4ORF1291P | |
| 1292 | AP2 domain-containing protein | |||
| 1384 | 62 aa hypothetical protein | |||
| 1385 | M | M.DacSJ4ORF4119P (92% identity) | M.DacSJ4ORF1385P | |
| 1386 | 87 aa hypothetical protein | |||
| 4118 | 87 aa hypothetical protein | |||
| 4119 | M | M.DacSJ4ORF1385P (92% identity) | M.DacSJ4ORF4119P | |
| 4120 | 56 aa hypothetical protein | |||
| 4565 | Protein of unknown function DUF262 | |||
| 4567 | M | M.DhaPCSSORF790P (46% identity) | CGATCG | M.DacSJ4ORF4567P |
| 4568 | SsrA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1604 | acetyltransferase/hydrolase with | |||
| 1605 | M | M.DacM1ORF12390P (78% identity) | M.DacSJ4ORF1605P | |
| 1606 | R | DacM1ORF12390P (65% identity) | DacSJ4ORF1605P | |
| 1607 | amidohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | 153 aa hypothetical protein | |||
| 361 | R | DspOTORF3852P (92% identity) | DacSJ4ORF361P | |
| 362 | 57 aa hypothetical protein | |||
| 1243 | 117 aa hypothetical protein | |||
| 1244 | R | PstCEB3MrrP (68% identity) | DacSJ4MrrP | |
| 1245 | site-specific recombinase XerD | |||