Ref: Lucas,S. et al. unpublished

REBASE ref # 16505

Complete sequence: 4,384,015 bp

GenBank #: CP002959

REBASE acronym: Tpa21527

Org_num: 8970

 

All begin Turpa_

Type I
ORF Gene Most similar Specificity Name
 
52 254 aa hypothetical protein
53 R WspCW3ORF8295P (55% identity) Tpa21527ORF58P
54 transposase IS200-family protein
55 S S.Tni14787ORF1043P (37% identity) S.Tpa21527ORF58P
56 Abi family protein
57 57 aa hypothetical protein
58 M M.SmyPG01ORF2792P (58% identity) M.Tpa21527ORF58P
59 Integrase catalytic region
 
563 218 aa hypothetical protein
564 M M.KstORFFP (78% identity) M.Tpa21527ORF564P
565 262 aa hypothetical protein
566 S S.NspAM1ORF15950P (34% identity) S.Tpa21527ORF564P
567 425 aa hypothetical protein
568 446 aa hypothetical protein
569 filamentation induced by cAMP protein Fic
570 R RarCa6ORF10420P (61% identity) Tpa21527ORF564P
571 205 aa hypothetical protein
 
2669 593 aa hypothetical protein
2670 M M.Mma14697ORF3141P (61% identity) M.Tpa21527ORF2670P
2671 S S.Sen83530ORF24105P (33% identity) S.Tpa21527ORF2670P
2672 399 aa hypothetical protein
2673 230 aa hypothetical protein
2674 pseudogene
2675 Integrase catalytic region
2676 476 aa hypothetical protein
2677 R GsuKNORF451P (62% identity) Tpa21527ORF2670P
2678 57 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
531 102 aa hypothetical protein
532 R Csp006ORF14190P (40% identity) Tpa21527ORF532P
533 DNA-cytosine methyltransferase
 
532 restriction endonuclease
533 M M.Lsp902ORF37670P (53% identity) GGWCC M.Tpa21527ORF533P
534 R SspHK05ORF52470P (42% identity) GGWCC Tpa21527ORF533P
535 PIN domain protein family protein
 
844 Alcohol dehydrogenase GroES domain protein
845 M M1.NspENR4ORF643P (70% identity) M.Tpa21527ORF845P
846 YcfA family protein
 
1452 242 aa hypothetical protein
1453 RM EsaSS1360ORFAP (11% identity) Tpa21527ORF1453P
1454 Antibiotic biosynthesis monooxygenase
 
3480 158 aa hypothetical protein
3481 R HspA3H3ORF1020007P (52% identity) GATC Tpa21527ORF3482P
3482 M M.NurNm10ORF1235P (79% identity) RGATCY M.Tpa21527ORF3482P
3483 plasmid stabilization system
 
3566 helicase domain-containing protein
3567 M M.Tpa21527ORF3604P (81% identity) M.Tpa21527ORF3567P
3568 181 aa hypothetical protein
 
3603 helicase domain-containing protein
3604 M M.Tpa21527ORF3567P (81% identity) M.Tpa21527ORF3604P
3605 182 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
3306 274 aa hypothetical protein
3307 R AmaDMcrAP (29% identity) Tpa21527ORF3307P
3308 168 aa hypothetical protein
 
3354 116 aa hypothetical protein
3355 R GspEPRMMrrP (58% identity) Tpa21527MrrP
3356 81 aa hypothetical protein