Thiocystis violascens DSM 198 |
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Putative Thiocystis violascens DSM 198 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14566
Complete sequence: 5,017,071 bp
GenBank #: CP003154
REBASE acronym: Tvi198
Org_num: 8962
All begin Thivi_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 586 | 91 aa hypothetical protein | |||
| 587 | M | M.IceTR32ORF9460P (64% identity) | M.Tvi198ORF587P | |
| 588 | 75 aa hypothetical protein | |||
| 589 | nucleic acid-binding protein, contains | |||
| 590 | S | S.PaePALA6ORF2068P (60% identity) | S.Tvi198ORF587P | |
| 591 | R | NhoORF2290008P (62% identity) | Tvi198ORF587P | |
| 592 | transcriptional regulator | |||
| 911 | 506 aa hypothetical protein | |||
| 912 | S | S.AveC4I (44% identity) | S.Tvi198ORF913P | |
| 913 | M | M.Pph9175ORF14175P (69% identity) | M.Tvi198ORF913P | |
| 914 | folylpolyglutamate synthase/dihydrofolate | |||
| 1541 | metal-dependent hydrolase | |||
| 1542 | R | Msp374BORF21245P (41% identity) | Tvi198ORF1547P | |
| 1543 | cytotoxic translational repressor of | |||
| 1544 | 68 aa hypothetical protein | |||
| 1545 | Appr-1-p processing protein | |||
| 1546 | S | S1.Aru1706ORF24810P (24% identity) | S.Tvi198ORF1547P | |
| 1547 | M | M.MfiC10ORFBP (41% identity) | M.Tvi198ORF1547P | |
| 1548 | 65 aa hypothetical protein | |||
| 2873 | general secretion pathway protein G | |||
| 2874 | M | M.TsyCad16ORFUP (74% identity) | M.Tvi198ORF2874P | |
| 2875 | 90 aa hypothetical protein | |||
| 2876 | acetyltransferase | |||
| 2877 | 68 aa hypothetical protein | |||
| 2878 | 120 aa hypothetical protein | |||
| 2879 | S | S.TsyCad16ORFCP (39% identity) | S.Tvi198ORF2874P | |
| 2880 | 194 aa hypothetical protein | |||
| 2881 | 67 aa hypothetical protein | |||
| 2882 | ATPase | |||
| 2883 | R | Hsp20947ORF13570P (74% identity) | Tvi198ORF2874P | |
| 2885 | metal-dependent hydrolase | |||
| 3902 | esterase of the alpha-beta hydrolase | |||
| ??? | R | TboBBSORF9875P (79% identity) | Tvi198ORF3907P | |
| 3904 | transcriptional regulator with HTH | |||
| 3905 | S | S.GprSS5ORF10865P (46% identity) | S.Tvi198ORF3907P | |
| 3907 | M | M.TboBBSORF9875P (87% identity) | M.Tvi198ORF3907P | |
| 3908 | SsrA-binding protein | |||
| 4459 | transposase | |||
| 4460 | M | M.DprORF2450P (88% identity) | M.Tvi198ORF4460P | |
| 4461 | S | S.Vsp252189ORF18215P (38% identity) | S.Tvi198ORF4460P | |
| 4462 | 43 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 270 | glycosyl transferase | |||
| 271 | RM | TsyCad16ORFE1P (15% identity) | Tvi198ORF271P | |
| 272 | transposase | |||
| 1475 | 862 aa hypothetical protein | |||
| 1476 | RM | HocORF601P (58% identity) | Tvi198ORF1476P | |
| 1477 | death-on-curing family protein | |||
| 3097 | cation/multidrug efflux pump | |||
| 3099 | M | M.Sth15344ORF14020P (85% identity) | GAGCTC | M.Tvi198ORF3099P |
| 3100 | 69 aa hypothetical protein | |||
| 3153 | 160 aa hypothetical protein | |||
| 3154 | RM | Psp001ORF12730P (42% identity) | Tvi198ORF3154P | |
| 3155 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |||
| 3525 | phage head morphogenesis protein, SPP1 gp7 | |||
| 3526 | M | M.GloIAEORF13015P (24% identity) | M.Tvi198ORF3526P | |
| 3527 | 43 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1103 | (LSU ribosomal protein L11P)-lysine | |||
| 1104 | M | M.Rsp0813ORF22645P (55% identity) | M.Tvi198ORF1104P | |
| 1105 | R | GspHR1ORF7585P (74% identity) | Tvi198ORF1104P | |
| 1106 | 222 aa hypothetical protein | |||
| 3143 | serine O-acetyltransferase | |||
| 3144 | M | M.Ide30977ORF18465P (52% identity) | M.Tvi198ORF3144P | |
| 3145 | 113 aa hypothetical protein | |||
| 3588 | 42 aa hypothetical protein | |||
| 3589 | R | Nar2447ORF7220P (49% identity) | Tvi198ORFAP | |
| 3590 | glutamine amidotransferase of anthranilate | |||
| 4132 | acetyltransferase (GNAT) family protein | |||
| 4133 | M | M.AteNZORF25430P (73% identity) | M.Tvi198ORF4133P | |
| 4134 | R | Psp3121ORFKP (52% identity) | Tvi198ORF4133P | |
| 4135 | 77 aa hypothetical protein | |||
| 4336 | signal transduction histidine kinase | |||
| 4337 | M | M.Bce23005ORF40P (54% identity) | M.Tvi198ORF4337P | |
| 4338 | ATPase | |||
| 4339 | 224 aa hypothetical protein | |||
| 4340 | addiction module toxin, RelE/StbE family | |||
| 4341 | addiction module antitoxin, RelB/DinJ family | |||
| 4342 | R | NspPLL12ORF2315P (80% identity) | Tvi198ORF4337P | |
| 4343 | UDP-galactose 4-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3852 | 306 aa hypothetical protein | |||
| 3853 | R | restriction endonuclease | Tvi198Mrr2P | |
| 3854 | 2-oxoglutarate dehydrogenase complex | |||
| 3972 | 71 aa hypothetical protein | |||
| 3973 | R | KstMrrP (78% identity) | Tvi198MrrP | |
| 3974 | 70 aa hypothetical protein | |||
| 4103 | microcin-processing peptidase 2 | |||
| 4104 | R | Pau4606ORF545P (74% identity) | Tvi198ORF4104P | |
| 4105 | protein of unknown function DUF29 | |||