Tistrella mobilis KA081020-065 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Tistrella mobilis KA081020-065 RM systems
Ref: Xu,Y. et al. J. Am. Chem. Soc. (2012) In press
REBASE ref # 14547
| Sequence length: | GenBank #: | |
| Chromosome: | 3,919,492 bp | CP003236 |
| plasmid pTM1: | 692,456 bp | CP003237 |
| plasmid pTM3: | 1,126,962 bp | CP003239 |
REBASE acronym: Tmo65
Org_num: 8946
All begin TMO_, TMO_a, TMO_c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTM1 | ||||
| 356 | type II restriction enzyme, methylase subunit | |||
| 357 | R | Psp151497ORF12490P (95% identity) | Tmo65ORF360P | |
| 358 | S | S.Sth15264ORF7820P (45% identity) | S.Tmo65ORF360P | |
| 359 | anticodon nuclease | |||
| 360 | M | M.SroR30ORF24700P (93% identity) | M.Tmo65ORF360P | |
| 361 | integrase, catalytic region | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2746 | Ribonuclease HII | |||
| 2747 | M | M.SstSB22ORF15410P (52% identity) | GANTC | M.Tmo65ORF2747P |
| 2748 | Tetratricopeptide repeat protein | |||
| plasmid pTM3 | ||||
| 174 | transcriptional regulator, LuxR | |||
| 175 | RM | Bsps200ORF36530P (66% identity) | Tmo65ORF175P | |
| 176 | LuxR family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTM3 | ||||
| 627 | 145 aa hypothetical protein | |||
| 628 | M | DNA methylase N-4/N-6 | M.Tmo65ORF628P | |
| 629 | R | MspM9AORF8125P (69% identity) | Tmo65ORF628P | |
| 630 | UvrD/REP type DNA helicase | |||