Emticicia oligotrophica DSM 17448 |
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Putative Emticicia oligotrophica DSM 17448 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14530
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,158 bp | CP002961 |
| plasmid pEMTOL01: | 190,222 bp | CP002962 |
| plasmid pEMTOL03: | 58,952 bp | CP002964 |
REBASE acronym: Eol17448
Org_num: 8912
All begin Emtol_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1526 | 129 aa hypothetical protein | |||
| 1527 | R | Fha23008ORFBP (67% identity) | Eol17448ORF1530P | |
| 1528 | filamentation induced by cAMP protein Fic | |||
| 1529 | 52 aa hypothetical protein | |||
| 1530 | M | M.AviKJ1I (79% identity) | M.Eol17448ORF1530P | |
| 1531 | 78 aa hypothetical protein | |||
| 1532 | protein of unknown function DUF132 | |||
| 1533 | 147 aa hypothetical protein | |||
| 1534 | S | S.Csp3001ORF2115P (58% identity) | S.Eol17448ORF1530P | |
| plasmid pEMTOL01 | ||||
| 190 | SMC domain protein | |||
| 191 | R | Fsp49ORF7730P (67% identity) | Eol17448ORF196P | |
| 192 | 101 aa hypothetical protein | |||
| 193 | 386 aa hypothetical protein | |||
| 194 | deoxycytidine triphosphate deaminase | |||
| 195 | S | S.RspSR1ORF29750P (37% identity) | S.Eol17448ORF196P | |
| 196 | M | M.FpsZ2ORF8620P (56% identity) | M.Eol17448ORF196P | |
| 197 | Protein of unknown function DUF2235 | |||
| plasmid pEMTOL03 | ||||
| 80 | initiator RepB protein | |||
| 81 | M | DNA methyltransferase | M.Eol17448ORF81P | |
| 82 | S | S.Fsp2155ORF4175P (43% identity) | S.Eol17448ORF81P | |
| 83 | 242 aa hypothetical protein | |||
| 84 | protein of unknown function DUF1814 | |||
| 85 | R | PspW16ORF7655P (10% identity) | Eol17448ORF81P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1120 | UvrD/REP helicase | |||
| 1121 | R | Csp1BORF7365P (82% identity) | GGNCC | Eol17448ORF1124P |
| 1122 | 310 aa hypothetical protein | |||
| 1123 | 64 aa hypothetical protein | |||
| 1124 | M | M.SthYORF1290P (90% identity) | GGNCC | M.Eol17448ORF1124P |
| 1125 | C | C.SthYORF1290P (94% identity) | C.Eol17448ORF1124P | |
| 1126 | pseudogene | |||
| 2248 | helix-turn-helix domain protein | |||
| 2249 | R | Rsl19594ORF3022P (54% identity) | Eol17448ORF2248P | |
| 2250 | helix-turn-helix domain protein | |||
| 3191 | helix-turn-helix domain protein | |||
| 3192 | RM | Cba13II (47% identity) | Eol17448ORF3192P | |
| 3193 | transposase IS4 family protein | |||
| 3648 | alpha/beta hydrolase fold containing protein | |||
| 3649 | M | M.Fsp414ORF6140P (60% identity) | GCGC | M.Eol17448ORF3649P |
| 3650 | R | Cin12929ORF390P (77% identity) | GCGC | Eol17448ORF3649P |
| 3651 | Aldehyde Dehydrogenase | |||
| plasmid pEMTOL01 | ||||
| 176 | 154 aa hypothetical protein | |||
| 177 | M | M.Sdi43527ORF6160P (50% identity) | GATC | M.Eol17448ORF177P |
| 178 | 67 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3043 | gluconate transporter | |||
| 3044 | R | SraDG5AMcrCP (33% identity) | Eol17448McrCP | |
| 3045 | blue (type 1) copper domain protein | |||