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Putative Prevotella intermedia 17 RM systems
Ref: Heidelberg,J. et al. unpublished
REBASE ref # 14457
Sequence length: | GenBank #: | |
chromosome I: | 579,647 bp | CP003502 |
chromosome II: | 2,119,790 bp | CP003503 |
REBASE acronym: Pin17
Org_num: 8812
All begin PIN17_, PIN17_A
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
401 | site-specific recombinase, phage integrase | |||
402 | S | S1.Pin172ORF2481P (69% identity) | S1.Pin17ORF406P | |
404 | 41 aa hypothetical protein | |||
403 | S | S.Pin17FV (100% identity) | S2.Pin17ORF406P | |
405 | 321 aa hypothetical protein | |||
406 | M | M.Pin17FV (100% identity) | M.Pin17ORF406P | |
407 | PF03235 family protein | |||
408 | R | Pin17FVP (100% identity) | Pin17ORF406P | |
409 | C | C.PinWW414ORF5835P (100% identity) | C.Pin17ORF406P | |
410 | transposase, IS4 family | |||
chromosome II | ||||
474 | PF01863 family protein | |||
475 | R | Pin17FIVP (100% identity) | Pin17ORF476P | |
476 | M | M.Pin17FIV (97% identity) | M.Pin17ORF476P | |
477 | PF06250 family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
248 | 964 aa hypothetical protein HMPREF9296_0159 | |||
249 | R | Pin17FIP (100% identity) | Pin17ORF250P | |
250 | M | M1.Pin17FI (100% identity) | GGATG | M1.Pin17ORF250P |
251 | M | M2.Pin17FI (100% identity) | GGATG | M2.Pin17ORF250P |
252 | PF14128 domain protein | |||
428 | SNF2 family N-terminal domain protein | |||
429 | RM | PdeF0115ORF8600P (97% identity) | Pin17ORF429P | |
430 | TaqI-like C-terminal specificity domain protein | |||
chromosome II | ||||
42 | 62 aa hypothetical protein | |||
43 | M | M.Pin17FORF8660P (100% identity) | M.Pin17ORF43P | |
44 | thymidylate synthase | |||
892 | 47 aa hypothetical protein | |||
894 | M | M.Pin17FORF2975P (93% identity) | M.Pin17ORF894P | |
895 | thymidylate synthase | |||
1857 | 49 aa hypothetical protein | |||
1858 | M | M1.Pin17FII (100% identity) | GATC | M1.Pin17ORF1858P |
1859 | 174 aa hypothetical protein | |||
1860 | M | M2.Pin17FIIP (100% identity) | GATC | M2.Pin17ORF1858P |
1862 | LytB protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
96 | polyketide cyclase/dehydrase and lipid | |||
97 | R | Pin17FMcrBP (100% identity) | Pin17McrBP | |
98 | McrBC 5-methylcytosine restriction system |