Deinococcus gobiensis I-0 |
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Putative Deinococcus gobiensis I-0 RM systems
Ref: Yuan,M. et al. unpublished
REBASE ref # 14157
| Sequence length: | GenBank #: | |
| Chromosome: | 3,137,147 bp | CP002191 |
| plasmid P2: | 424,524 bp | CP002193 |
| plasmid P3: | 231,600 bp | CP002194 |
| plasmid P4: | 72,036 bp | CP002195 |
REBASE acronym: DgoI0
Org_num: 8571
All begin DGo_CA, DGo_CAnc, DGo_PB, DGo_PC, DGo_PD
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2774 | 132 aa hypothetical protein | |||
| 2775 | M | M.DspAJ005ORF14085P (85% identity) | M.DgoI0ORF2775P | |
| 2776 | 131 aa hypothetical protein | |||
| 2777 | 597 aa hypothetical protein | |||
| 2778 | S | S.Ran24876ORF2420P (28% identity) | S.DgoI0ORF2775P | |
| 2779 | transcriptional regulator | |||
| 2780 | 428 aa hypothetical protein | |||
| 2781 | R | DspAJ005ORF14085P (76% identity) | DgoI0ORF2775P | |
| 2782 | ABC-type branched-chain amino acid transport | |||
| plasmid P3 | ||||
| 4 | 67 aa hypothetical protein | |||
| 5 | M | M.Dsp1210ORF16500P (73% identity) | M.DgoI0ORF5P | |
| 6 | S | S.FbaA5CORFNP (30% identity) | S.DgoI0ORF5P | |
| 7 | 195 aa hypothetical protein | |||
| 8 | R | Dsp1210ORF16500P (70% identity) | DgoI0ORF5P | |
| 9 | 1286 aa hypothetical protein | |||
| plasmid P4 | ||||
| 30 | 78 aa hypothetical protein | |||
| ??? | S | Type I restriction modification DNA specificity domain protein | S.DgoI0ORFAP | |
| 31 | Transposase, IS4 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2003 | 102 aa hypothetical protein | |||
| 2004 | M | M.Dma26562ORF397P (48% identity) | TCTAGA | M.DgoI0ORF2004P |
| 14 | pseudogene | |||
| plasmid P2 | ||||
| 484 | 93 aa hypothetical protein | |||
| 485 | M | M2.DspQL22ORF2400P (67% identity) | M.DgoI0ORF485P | |
| 486 | 59 aa hypothetical protein | |||
| 493 | 170 aa hypothetical protein | |||
| 494 | M | Site-specific DNA-methyxltransferase | CTGCAG | M.DgoI0ORF494P |
| 495 | Histidine kinase | |||
| plasmid P3 | ||||
| 13 | 212 aa hypothetical protein | |||
| 14 | RM | Daq314ORF17150P (32% identity) | DgoI0ORF14P | |
| 15 | 106 aa hypothetical protein | |||
| 278 | 100 aa hypothetical protein | |||
| 279 | RM | DspD7000ORF20520P (25% identity) | DgoI0ORF279P | |
| 280 | 394 aa hypothetical protein | |||
| plasmid P4 | ||||
| 32 | transposase | |||
| 33 | V | V.DacSJTRORF16470P (53% identity) | V.DgoI0ORF36P | |
| 34 | 567 aa hypothetical protein | |||
| 35 | 565 aa hypothetical protein | |||
| 36 | M | M.MspM6AORF25865P (61% identity) | ACCGGT | M.DgoI0ORF36P |
| 37 | Transposase, IS4 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid P4 | ||||
| 34 | 567 aa hypothetical protein | |||
| 35 | R | 565 aa hypothetical protein | DgoI0McrBP | |
| 36 | methyltransferase protein | |||