Methanoregula boonei 6A8 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Methanoregula boonei 6A8 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10228
Complete sequence: 2,542,943 bp
GenBank #: CP000780 (NC_009712)
REBASE acronym: Mbo6A8
Org_num: 4827
All begin Mboo_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1029 | 119 aa hypothetical protein | |||
| 1030 | R | MpaEORF901P (84% identity) | TGANNNNNNNNTGCT | Mbo6A8ORF1031P |
| 1031 | M | M.MpaEORF901P (86% identity) | TGANNNNNNNNTGCT | M.Mbo6A8ORF1031P |
| 1032 | S | S.Mme11130ORF8440P (22% identity) | TGANNNNNNNNTGCT | S.Mbo6A8ORF1031P |
| 1033 | 422 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 192 | 183 aa hypothetical protein | |||
| 193 | RM | 684 aa hypothetical protein | Mbo6A8ORF193P | |
| 194 | domain of unknown function DUF1743 | |||
| 282 | 368 aa hypothetical protein | |||
| 283 | M | DNA methylase N-4/N-6 domain protein | M.Mbo6A8ORF283P | |
| 284 | LVIVD repeat protein | |||
| 355 | type III restriction enzyme, res subunit | |||
| 356 | M | M.MpaEDndAP (83% identity) | M.Mbo6A8DndAP | |
| 357 | 141 aa hypothetical protein | |||
| 356 | aminotransferase, class V | |||
| 357 | M | M.MpaEDndEP (77% identity) | M.Mbo6A8DndEP | |
| 358 | SMC protein-like protein | |||
| 357 | 141 aa hypothetical protein | |||
| 358 | M | M.MpaEDndDP (64% identity) | M.Mbo6A8DndDP | |
| 359 | phosphoadenosine phosphosulfate reductase | |||
| 358 | SMC protein-like protein | |||
| 359 | M | M.MpaEDndCP (78% identity) | M.Mbo6A8DndCP | |
| 360 | 380 aa conserved hypothetical protein | |||
| 359 | phosphoadenosine phosphosulfate reductase | |||
| 360 | M | M.MpaEDndBP (62% identity) | M.Mbo6A8DndBP | |
| 361 | 94 aa hypothetical protein | |||
| 468 | 174 aa hypothetical protein | |||
| 469 | M | M.MfoSMSORF2818P (76% identity) | CCGG | M.Mbo6A8ORF469P |
| 470 | protein of unknown function UPF0066 | |||
| 504 | Indolepyruvate ferredoxin oxidoreductase | |||
| 505 | M | M.MfoSMSORF2676P (76% identity) | M.Mbo6A8ORF505P | |
| 506 | phage integrase family protein | |||
| 1002 | 139 aa hypothetical protein | |||
| 1003 | M | DNA adenine methylase | GATC | M.Mbo6A8ORF1003P |
| 1004 | 227 aa hypothetical protein | |||
| 2205 | ABC-1 domain protein | |||
| 2206 | M | M.MfoSMSORF512P (64% identity) | GTAC | M.Mbo6A8ORF2206P |
| 2207 | 64 aa hypothetical protein | |||
| 2336 | response regulator receiver protein | |||
| 2337 | M | M.Cpa267ORF17010P (52% identity) | CTCGAG | M.Mbo6A8ORF2337P |
| 2338 | R | PinP57IIP (40% identity) | CTCGAG | Mbo6A8ORF2337P |
| 2339 | Methyltransferase type 11 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 153 | protein of unknown function UPF0150 | |||
| 154 | R | Cbo15925MrrP (12% identity) | Mbo6A8MrrP | |
| 155 | protein of unknown function DUF35 | |||