Solitalea canadensis DSM 3403 |
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Putative Solitalea canadensis DSM 3403 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14225
Complete sequence: 5,202,069 bp
GenBank #: CP003349
REBASE acronym: Sca3403
Org_num: 8634
All begin Solca_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1965 | pseudogene | |||
| 1966 | R | CcoA37T2ORF102274P (91% identity) | CAGNNNNNNRTGG | Sca3403IP |
| 1967 | virulence protein | |||
| 1968 | S | S1.Pga1313ORF4740P (52% identity) | CAGNNNNNNRTGG | S.Sca3403I |
| 1969 | TIGR02436 family protein | |||
| 1970 | pseudogene | |||
| 1971 | M | M.CcoA37T2ORF102274P (90% identity) | CAGNNNNNNRTGG | M.Sca3403I |
| 1972 | C | C.SspNJ44ORFDP (57% identity) | C.Sca3403IP | |
| 1973 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 189 | Protein of unknown function DUF262 | |||
| 190 | M | M.Ave16549ORFDP (59% identity) | CTGCAG | M.Sca3403II |
| 191 | transposase | |||
| 1818 | 304 aa hypothetical protein | |||
| 1819 | R | Csp1310ORF33320P (53% identity) | Sca3403ORF1820P | |
| 1820 | M | M.Csp1310ORF33320P (71% identity) | M.Sca3403ORF1820P | |
| 1821 | A/G-specific DNA glycosylase | |||
| 3696 | 205 aa hypothetical protein | |||
| 3697 | RM | Afl52984ORF6275P (70% identity) | Sca3403ORF3697P | |
| 3700 | protein containing C-terminal region/beta chain | |||
| 3831 | 284 aa hypothetical protein | |||
| 3832 | RM | Sba196ORFDP (47% identity) | Sca3403ORF3832P | |
| 3833 | 306 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3832 | type II restriction endonuclease | |||
| 3833 | R | LpnLMrrP (52% identity) | Sca3403MrrP | |
| 3834 | 280 aa hypothetical protein | |||