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Putative Vibrio cholerae IEC224 RM systems
Ref: Garza,D.R. Jr. et al. unpublished
REBASE ref # 14424
Sequence length: | GenBank #: | |
chromosome I: | 3,007,450 bp | CP003330 |
chromosome II: | 1,072,136 bp | CP003331 |
REBASE acronym: Vch224
Org_num: 8636
All begin O3Y_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
8540 | 706 aa hypothetical protein | |||
8545 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch224ORF8565P |
8550 | 663 aa hypothetical protein | |||
8555 | 470 aa hypothetical protein | |||
8560 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch224ORF8565P |
8565 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch224ORF8565P |
8570 | 687 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
12570 | ribulose-phosphate 3-epimerase | |||
12575 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch224DamP |
12580 | DamX protein | |||
chromosome II | ||||
14393 | guanosine 5-monophosphate oxidoreductase | |||
14398 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch224ORF14398P |
14403 | 638 aa hypothetical protein | |||
15608 | 63 aa hypothetical protein | |||
15613 | M | M.VspNIH41ORF3529P (93% identity) | M.Vch224ORF15613P | |
15618 | 141 aa hypothetical protein |