Putative Acetobacterium woodii DSM 1030 RM systems
Ref: Poehlein,A. et al. unpublished
REBASE ref # 14120
Complete sequence: 4,044,777 bp
GenBank #: CP002987
REBASE acronym: Awo1030
Org_num: 8566
All begin Awo_c
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4410 | 258 aa hypothetical protein | |||
4420 | M | M.Cth5807ORF17305P (60% identity) | M.Awo1030ORF4420P | |
4430 | 68 aa hypothetical protein | |||
??? | S | S.PstTS44ORF14865P (31% identity) | S.Awo1030ORF4420P | |
4460 | 1210 aa hypothetical protein | |||
8790 | cellulase CelA | |||
8800 | M | M.Ces5ORF24430P (90% identity) | TAAGNNNNNTCC | M.Awo1030II |
8810 | S | S.Dli5ac10ORF58600P (28% identity) | TAAGNNNNNTCC | S.Awo1030II |
8820 | 505 aa hypothetical protein | |||
8830 | deoxyguanosinetriphosphate triphosphohydrolase | |||
8840 | 118 aa hypothetical protein | |||
8850 | 394 aa hypothetical protein | |||
8860 | 203 aa hypothetical protein | |||
8870 | R | Efa6605ORF11010P (75% identity) | TAAGNNNNNTCC | Awo1030IIP |
8880 | 197 aa hypothetical protein | |||
17100 | type I restriction-modification system methylase | |||
17110 | R | EbaES3ORF7250P (89% identity) | GATGNNNNNNTGC | Awo1030IIIP |
17120 | 400 aa hypothetical protein | |||
17130 | S | S.Vch1126ORFAP (61% identity) | GATGNNNNNNTGC | S.Awo1030III |
17140 | M | M.EbaES3ORF7250P (92% identity) | GATGNNNNNNTGC | M.Awo1030III |
17150 | 1077 aa hypothetical protein | |||
17820 | DNA polymerase III PolC1 | |||
17830 | R | type I restriction-modification system | Awo1030ORF17840P | |
17840 | M | type I restriction-modification system | M.Awo1030ORF17840P | |
17850 | signal transduction protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
6450 | tyrosine recombinase Xer | |||
6460 | M | M.Hma26143ORFBP (75% identity) | CCGG | M.Awo1030ORF6460P |
??? | R | Hma26143ORFBP (77% identity) | CCGG | Awo1030ORF6460P |
6490 | response regulator receiver protein | |||
6500 | V | V.Esi703ORF17980P (58% identity) | V.Awo1030ORF6460P | |
6510 | 46 aa hypothetical protein | |||
14450 | penicillinase repressor | |||
14460 | M | M.AspKB1ORF17645P (69% identity) | M.Awo1030ORF14460P | |
14470 | recombination factor protein RarA | |||
18560 | 604 aa hypothetical protein | |||
18570 | M | M.Awi1911ORF5370P (88% identity) | M.Awo1030ORF18570P | |
18580 | 296 aa hypothetical protein | |||
18580 | 296 aa hypothetical protein | |||
18590 | M | M.Awi1911ORF5390P (90% identity) | CCWGG | M.Awo1030I |
??? | V | V.Awi1911ORF5390P (83% identity) | V.Awo1030IP | |
18600 | R | Awi1911ORF30570P (81% identity) | CCWGG | Awo1030IP |
18610 | 361 aa hypothetical protein | |||
19730 | GTP-binding protein EngA | |||
19740 | RM | PmeBin37ORFBP (65% identity) | GCCRAG | Awo1030IV |
19750 | transposase | |||
30850 | membrane protein | |||
30860 | M | M.AwiYORF18765P (93% identity) | M.Awo1030ORF30860P | |
30870 | 305 aa hypothetical protein | |||
31120 | 73 aa hypothetical protein | |||
31130 | M | M.Awo1030ORF35200P (90% identity) | M.Awo1030ORF31130P | |
31140 | 56 aa hypothetical protein | |||
34910 | transposase B, IS655 family | |||
34920 | M | M.Awi1911ORF7660P (93% identity) | M.Awo1030ORF34920P | |
34930 | surface protein containing ChW-repeats | |||
35170 | 112 aa hypothetical protein | |||
35180 | M | M.DhaPCSSORF1382P (65% identity) | TGGCCA | M.Awo1030ORF35180P |
35190 | 284 aa hypothetical protein | |||
35190 | 284 aa hypothetical protein | |||
35200 | M | M.Awo1030ORF31130P (90% identity) | M.Awo1030ORF35200P | |
35210 | 61 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
320 | methyltransferase type 11 | |||
330 | R | 5-methylcytosine-specific restriction enzyme | Awo1030McrBP | |
340 | copper homeostasis operon regulatory protein | |||
18540 | DNA repair protein RadC1 | |||
18550 | R | AwiCH1ORF1894P (15% identity) | Awo1030ORF18550P | |
18560 | 604 aa hypothetical protein | |||
28210 | 143 aa hypothetical protein | |||
28220 | R | 828 aa hypothetical protein | Awo1030McrB2P | |
28230 | 193 aa hypothetical protein |