Helicobacter pylori 98-10 |
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Putative Helicobacter pylori 98-10 RM systems
Ref: McClain,M.S. et al. BMC Genomics 10, 3 (2009)
REBASE ref # 13845
Contig set: 1,571,772 bp
GenBank #: ABSX00000000 (NZ_ABSX00000000)
REBASE acronym: Hpy9810
Org_num: 8032
All begin HP9810_873g, HP9810_885g, HP9810_901g, HP9810_903g
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 235 aa hypothetical protein | |||
| 3 | R | Hpy35ORF20128P (98% identity) | Hpy9810ORF4P | |
| ??? | M | M.Hpy63ORF1444P (97% identity) | M.Hpy9810ORF4P | |
| 6 | S | S.HpyCHN1ORF7355P (97% identity) | S.Hpy9810ORF4P | |
| 7 | 208 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 717 aa hypothetical protein | |||
| ??? | RM | HpyMA15ORF7235P (93% identity) | Hpy9810ORF21P | |
| 23 | 395 aa hypothetical protein | |||
| 36 | 376 aa hypothetical protein | |||
| 37 | R | HpyF210ORF1451P (50% identity) | CCATC | Hpy9810ORF37P |
| 27 | 228 aa hypothetical protein | |||
| 28 | R | HpyK118ORF4345P (99% identity) | GGCC | Hpy9810ORF29P |
| 29 | M | M.Hpy3401ORF9580P (100% identity) | GGCC | M.Hpy9810ORF29P |
| 30 | 75 aa hypothetical protein | |||
| 30 | 499 aa hypothetical protein | |||
| 31 | M | M2.HpyJ002ORF305P (94% identity) | CCTC | M.Hpy9810ORF31P |
| 4 | 67 aa hypothetical protein | |||
| 5 | M | M.HpyOK305ORFKP (98% identity) | GCGC | M.Hpy9810ORF5P |
| 6 | 144 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16 | 621 aa hypothetical protein | |||
| ??? | M | M.HpyP90ORFRP (97% identity) | M.Hpy9810ORF17P | |
| 19 | R | HpyBR12ORF7105P (97% identity) | Hpy9810ORF17P | |
| 20 | 717 aa hypothetical protein | |||