Unidentified bacterium MD (mine drainage metagenome) |
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Putative Unidentified bacterium MD (mine drainage metagenome) RM systems
Ref: Dick,G.J. et al. Genome Biol. 10 (8), R85 (2009)
REBASE ref # 14020
GenBank #: ACXJ00000000
REBASE acronym: UbaMD
Org_num: 8486
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | type I restriction-modification system endonuclease XF2739 | UbaMDORFTP | |
| ??? | Type I restriction modification system, specificity protein | |||
| ??? | type I restriction-modification system endonuclease XF2739 | |||
| ??? | S | S.Cba153FORF1955P (21% identity) | S.UbaMDORFUP | |
| ??? | M | type I restriction-modification | M.UbaMDORFF1P | |
| ??? | M | N-6 DNA methylase | M.UbaMDORFK1P | |
| ??? | M | M.UbaMDORFS8P (27% identity) | M.UbaMDORFL1P | |
| ??? | R | HsdR family type I site-specific deoxyribonuclease | UbaMDORFN1P | |
| ??? | R | BspYN101ORF5535P (21% identity) | UbaMDORFU1P | |
| ??? | S | S.TarBDKEORF792P (27% identity) | S.UbaMDORFC2P | |
| ??? | M | type I restriction enzyme M protein | M.UbaMDORFC2P | |
| ??? | M | M.Wma42284ORF2854P (39% identity) | M.UbaMDORFE2P | |
| ??? | R | SdeCho1ORF20313P (28% identity) | UbaMDORFI2P | |
| ??? | M | type I restriction-modification system methylation subunit | M.UbaMDORFM2P | |
| ??? | S | S.UbaMDORFT4P (52% identity) | S.UbaMDORFM2P | |
| ??? | R | UbaMDORFU10P (34% identity) | UbaMDORFT2P | |
| ??? | Restriction endonuclease S subunit | |||
| ??? | R | type I site-specific deoxyribonuclease, HsdR family | UbaMDORFA3P | |
| ??? | S | S.EsaRM29ORFAP (50% identity) | S.UbaMDORFF3P | |
| ??? | R | unnamed protein product | UbaMDORFM3P | |
| ??? | S | S.MspL94I (25% identity) | S.UbaMDORFO3P | |
| ??? | S | S.Aba19ORF15275P (21% identity) | S.UbaMDORFP3P | |
| ??? | M | M.UbaMDORFI6P (62% identity) | M.UbaMDORFP3P | |
| ??? | 127 aa hypothetical protein HMPREF9628_01059 | |||
| ??? | R | type I restriction-modification system endonuclease XF2739 | UbaMDORFU3P | |
| ??? | S | 127 aa hypothetical protein HMPREF9628_01059 | S.UbaMDORFT3P | |
| ??? | type I restriction-modification system endonuclease XF2739 | |||
| ??? | R | TarBDKEORF792P (35% identity) | UbaMDORFZ3P | |
| ??? | M | M.EsaRM30ORFAP (68% identity) | M.UbaMDORFK4P | |
| ??? | M | type I restriction-modification system methyltransferase subunit | M.UbaMDORFM4P | |
| ??? | S | S.BspP25ORF18525P (20% identity) | S.UbaMDORFM4P | |
| ??? | R | TarBDKEORF792P (6% identity) | UbaMDORFT4P | |
| ??? | S | S.UbaMDORFM2P (52% identity) | S.UbaMDORFT4P | |
| ??? | M | type I restriction-modification system methylation subunit | M.UbaMDORFT4P | |
| ??? | R | Ccy1203ORF16775P (35% identity) | UbaMDORFW4P | |
| ??? | M | M.Dsa435ORF14355P (24% identity) | M.UbaMDORFC5P | |
| ??? | M | M.Psp93ORF4015P (41% identity) | M.UbaMDORFI5P | |
| ??? | M | M.AarEBORF42P (14% identity) | M.UbaMDORFJ5P | |
| ??? | S | S.Asp31YI (37% identity) | S.UbaMDORFJ5P | |
| ??? | M | M.HspSDIDORF1569P (34% identity) | M.UbaMDORFM5P | |
| ??? | S | S.SspW6ORFHP (35% identity) | S.UbaMDORFM5P | |
| ??? | R | unnamed protein product | UbaMDORFM5P | |
| ??? | R | Gba60955ORFBP (53% identity) | UbaMDORFO5P | |
| ??? | S | S.PspHY158ORF90P (36% identity) | S.UbaMDORFO5P | |
| ??? | M | M.TelBI (77% identity) | M.UbaMDORFV5P | |
| ??? | R | Keb45196ORF12780P (16% identity) | UbaMDORFW5P | |
| ??? | M | M.EsaRM29ORFAP (90% identity) | M.UbaMDORFX5P | |
| ??? | S | S.EnaZM001ORF7600P (17% identity) | S.UbaMDORFZ5P | |
| ??? | M | M.AphORF884P (48% identity) | M.UbaMDORFZ5P | |
| ??? | M | M.Bse114ORF4695P (69% identity) | M.UbaMDORFI6P | |
| ??? | S | S.Tsp72310ORF11505P (29% identity) | S.UbaMDORFI6P | |
| ??? | R | Ccy1203ORF16775P (35% identity) | UbaMDORFJ6P | |
| ??? | M | hypothetical protein | M.UbaMDORFR6P | |
| ??? | R | UbaMDORFN1P (69% identity) | UbaMDORFB7P | |
| ??? | M | M.UbaMDORFO8P (94% identity) | M.UbaMDORFC7P | |
| ??? | M | N-6 DNA methylase | M.UbaMDORFN9P | |
| ??? | R | UbaMDORFO8P (86% identity) | UbaMDORFV9P | |
| ??? | S | S.UbaMDORFO8P (48% identity) | S.UbaMDORFV9P | |
| ??? | M | M.EsaRM33ORFAP (22% identity) | M.UbaMDORFA10P | |
| ??? | R | EsaRM33ORFAP (84% identity) | UbaMDORFA10P | |
| ??? | S | S.EsaRM34ORFAP (39% identity) | S.UbaMDORFG10P | |
| ??? | M | M.EsaRM33ORFAP (25% identity) | M.UbaMDORFG10P | |
| ??? | M | M.UbaMDORFI6P (45% identity) | M.UbaMDORFJ10P | |
| ??? | R | UbaMDORFT2P (34% identity) | UbaMDORFU10P | |
| ??? | S | S.VfuMT14ORF955P (30% identity) | S.UbaMDORFU10P | |
| ??? | M | M.MbaWORF3703P (49% identity) | M.UbaMDORFU10P | |
| ??? | Restriction endonuclease S subunit | |||
| ??? | R | LfeYSKORF11315P (98% identity) | UbaMDORFE11P | |
| ??? | S | Restriction endonuclease S subunit | S.UbaMDORFD11P | |
| ??? | unnamed protein product | |||
| ??? | S | S.Mmo22980ORF90P (34% identity) | S.UbaMDORFO11P | |
| ??? | restriction endonuclease | |||
| ??? | M | M.LfeYSKORF11315P (99% identity) | M.UbaMDORFO11P | |
| ??? | R | UbaMDORFE11P (82% identity) | UbaMDORFJ8P | |
| ??? | S | S.Rel19469ORF532P (52% identity) | S.UbaMDORFJ8P | |
| ??? | M | M.LfeYSKORF11315P (83% identity) | M.UbaMDORFJ8P | |
| ??? | S | S.EsaRM30ORFAP (46% identity) | S.UbaMDORFL8P | |
| ??? | type I site-specific deoxyribonuclease, HsdR family | |||
| ??? | Type I restriction modification system, specificity protein | |||
| ??? | R | LfeC23ORF347P (96% identity) | UbaMDORFM8P | |
| ??? | M | M.UbaMDORFC7P (94% identity) | M.UbaMDORFO8P | |
| ??? | S | S.UbaMDORFV9P (48% identity) | S.UbaMDORFO8P | |
| ??? | R | UbaMDORFV9P (86% identity) | UbaMDORFO8P | |
| ??? | M | M.UbaMDORFL1P (27% identity) | M.UbaMDORFS8P | |
| ??? | S | S.EpeCp2ORF5420P (27% identity) | S.UbaMDORFW7P | |
| ??? | M | M.DprORF2450P (73% identity) | M.UbaMDORFW7P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | DNA modification methylase M.SthI | M.UbaMDORFBP | |
| ??? | RM | UbaMDORFX9P (20% identity) | UbaMDORFCP | |
| ??? | RM | type III restriction enzyme, res subunit | UbaMDORFDP | |
| ??? | M | 212 aa hypothetical protein Tter_2145 | M.UbaMDORFEP | |
| ??? | RM | UarASSA1ORF3305P (15% identity) | UbaMDORFFP | |
| ??? | M | 231 aa hypothetical protein MLP_22330 | M.UbaMDORFGP | |
| ??? | RM | TarEpORFBP (20% identity) | UbaMDORFHP | |
| ??? | RM | UbaMDORFW9P (24% identity) | UbaMDORFJP | |
| ??? | RM | adenine specific DNA methyltransferase | UbaMDORFLP | |
| ??? | RM | LfeML04ORF1685P (9% identity) | UbaMDORFNP | |
| ??? | RM | type III restriction enzyme, res subunit | UbaMDORFOP | |
| ??? | M | unnamed protein product | TCTAGA | M.UbaMDORFPP |
| ??? | RM | EsaRM47ORFAP (76% identity) | UbaMDORFQP | |
| ??? | RM | UbaMDORFF5P (84% identity) | UbaMDORFSP | |
| ??? | M | adenine specific DNA methyltransferase | GANTC | M.UbaMDORFVP |
| ??? | R | type II restriction enzyme | UbaMDORFWP | |
| ??? | RM | UbaMDORFV8P (25% identity) | UbaMDORFZP | |
| ??? | M | 293 aa hypothetical protein Ocepr_2221 | M.UbaMDORFA1P | |
| ??? | M | M.Iba58843ORF13110P (37% identity) | CGCG | M.UbaMDORFB1P |
| ??? | RM | UbaMDORFB3P (15% identity) | UbaMDORFC1P | |
| ??? | M | M.UbaMDORFN6P (19% identity) | M.UbaMDORFE1P | |
| ??? | M | M.BtgI (31% identity) | CCRYGG | M.UbaMDORFG1P |
| ??? | M | M.Aac41ORF2442P (28% identity) | CCGCGG | M.UbaMDORFH1P |
| ??? | M | transcriptional regulator, XRE family | CCWGG | M.UbaMDORFM1P |
| ??? | R | 201 aa hypothetical protein EUBVEN_01843 | CCGG | UbaMDORFO1P |
| ??? | M | methylase | CCGG | M.UbaMDORFP1P |
| ??? | V | 109 aa hypothetical protein NEIFLAOT_01353 | V.UbaMDORFP1P | |
| ??? | M | M.FbaR501ORF2029P (20% identity) | TGGCCA | M.UbaMDORFQ1P |
| ??? | M | M.EhaHP31ORF130P (13% identity) | AAGCTT | M.UbaMDORFS1P |
| ??? | RM | Nba55ORF10780P (7% identity) | UbaMDORFT1P | |
| ??? | R | UbaMDORFM7P (36% identity) | GTAC | UbaMDORFV1P |
| ??? | M | M.UbaMDORFZ4P (55% identity) | GTAC | M.UbaMDORFV1P |
| ??? | M | 171 aa hypothetical protein Acel_0814 | M.UbaMDORFX1P | |
| ??? | RM | hypothetical protein | UbaMDORFY1P | |
| ??? | RM | BsaDD2ORF1527P (9% identity) | UbaMDORFZ1P | |
| ??? | M | M.UbaMDORFW3P (26% identity) | M.UbaMDORFA2P | |
| ??? | M | methyltransferase | M.UbaMDORFB2P | |
| ??? | M | RecName: Full=Modification methylase Cfr9I; Short=M.Cfr9I; AltName: Full=N- cytosine-specific methyltransferase Cfr9I | M.UbaMDORFD2P | |
| ??? | M | M.XfuRORFBP (39% identity) | GTCGAC | M.UbaMDORFF2P |
| ??? | M | Avi630ORF16230P (29% identity) | TCTAGA | M.UbaMDORFH2P |
| ??? | R | ThaI (83% identity) | CGCG | UbaMDORFJ2P |
| ??? | M | M.ThaI (47% identity) | CGCG | M.UbaMDORFK2P |
| ??? | M | M.Tfr970ORF2124P (19% identity) | AGGCCT | M.UbaMDORFL2P |
| ??? | RM | type IV site-specific deoxyribonuclease Eco57I | UbaMDORFN2P | |
| ??? | RM | UbaMDORFB3P (10% identity) | UbaMDORFO2P | |
| ??? | RM | adenine specific DNA methyltransferase, putative | UbaMDORFP2P | |
| ??? | M | 300 aa hypothetical protein N47_A11650 | AAGCTT | M.UbaMDORFQ2P |
| ??? | RM | 263 aa conserved hypothetical protein | UbaMDORFR2P | |
| ??? | RM | unnamed protein product | UbaMDORFV2P | |
| ??? | RM | UbaMDORFV8P (24% identity) | UbaMDORFW2P | |
| ??? | M | M2.EfaPOP3ORF2825P (45% identity) | CCSGG | M.UbaMDORFZ2P |
| ??? | M | M.NspS713ORFBP (14% identity) | M.UbaMDORFC3P | |
| ??? | RM | LspCF1ORF11740P (13% identity) | UbaMDORFD3P | |
| ??? | M | M.CulEspORF886P (16% identity) | GCSGC | M.UbaMDORFG3P |
| ??? | M | M.UbaMDORFI3P (100% identity) | AGGCCT | M.UbaMDORFH3P |
| ??? | M | M.UbaMDORFH3P (100% identity) | AGGCCT | M.UbaMDORFI3P |
| ??? | M | M.Dme1002ORF6870P (15% identity) | M.UbaMDORFL3P | |
| ??? | M | M.Aba26256ORF11440P (19% identity) | CGCG | M.UbaMDORFN3P |
| ??? | M | M.PbaPan265ORF6000P (29% identity) | GCSGC | M.UbaMDORFS3P |
| ??? | M | M.MspsSG1ORF1640P (15% identity) | M.UbaMDORFV3P | |
| ??? | M | M.FacAORFAP (37% identity) | M.UbaMDORFW3P | |
| ??? | R | Type II site-specific deoxyribonuclease | CCWGG | UbaMDORFX3P |
| ??? | M | M.OspVa3ORF4575P (45% identity) | CCWGG | M.UbaMDORFY3P |
| ??? | M | DNA methylase | CGCG | M.UbaMDORFA4P |
| ??? | M | M.Tsp2015ORF9090P (57% identity) | M.UbaMDORFC4P | |
| ??? | R | Xfu49ORF2810P (48% identity) | GTCGAC | UbaMDORFD4P |
| ??? | M | M.Mac2ORFBP (72% identity) | M.UbaMDORFG4P | |
| ??? | M | M.TarNAS02ORF1049P (51% identity) | GTSAC | M.UbaMDORFH4P |
| ??? | RM | UbaMDORFV8P (37% identity) | UbaMDORFI4P | |
| ??? | M | DNA methylase N-4/N-6 domain protein | GTAC | M.UbaMDORFN4P |
| ??? | M | M.TarBDKEORF1731P (34% identity) | M.UbaMDORFO4P | |
| ??? | RM | UbaMDORFX9P (16% identity) | UbaMDORFJ3P | |
| ??? | M | M.Iis13165ORF4760P (26% identity) | ACGGC | M.UbaMDORFR4P |
| ??? | RM | Lfe14647ORF803P (21% identity) | UbaMDORFU4P | |
| ??? | RM | UbaMDORFB3P (29% identity) | UbaMDORFV4P | |
| ??? | RM | UbaMDORFW9P (24% identity) | UbaMDORFX4P | |
| ??? | R | LfeML04ORF2182P (43% identity) | CCWGG | UbaMDORFY4P |
| ??? | V | V.LfeML04ORF2182P (59% identity) | V.UbaMDORFY4P | |
| ??? | M | M.UbaMDORFV1P (55% identity) | GTAC | M.UbaMDORFZ4P |
| ??? | RM | UbaMDORFL10P (30% identity) | UbaMDORFB5P | |
| ??? | M | M.Mky204ORFDP (30% identity) | GCCGGC | M.UbaMDORFD5P |
| ??? | M | M.AthUNI1ORF430P (68% identity) | GGCC | M.UbaMDORFE5P |
| ??? | RM | UbaMDORFB3P (21% identity) | UbaMDORFF5P | |
| ??? | RM | EsaRM41ORFAP (75% identity) | UbaMDORFK5P | |
| ??? | M | M.Asu27374ORFAP (23% identity) | GCNGC | M.UbaMDORFL5P |
| ??? | M | M.Mmo22980ORF91P (38% identity) | M.UbaMDORFN5P | |
| ??? | M | M.UbaMDORFT6P (33% identity) | M.UbaMDORFP5P | |
| ??? | hypothetical protein | |||
| ??? | RM | EsaRM15ORFAP (35% identity) | UbaMDORFR5P | |
| ??? | M | M.UbaMDORFQ10P (38% identity) | M1.UbaMDORFU5P | |
| ??? | M | M.Mma225ORF480P (61% identity) | GAAGA | M2.UbaMDORFU5P |
| ??? | M | adenine-specific DNA-methyltransferase | TTAA | M.UbaMDORFY5P |
| ??? | M | M.BsuSPORF2850P (33% identity) | GCSGC | M.UbaMDORFC6P |
| ??? | M | M.AbaYM16ORF36290P (20% identity) | CGCG | M.UbaMDORFD6P |
| ??? | R | EsaRM63ORFAP (63% identity) | GGNCC | UbaMDORFF6P |
| ??? | M | M.LkiPN5ORF5430P (61% identity) | RGCGCY | M.UbaMDORFG6P |
| ??? | M | M.Hma10411ORF406P (21% identity) | CATG | M.UbaMDORFK6P |
| ??? | M | M.Cdi30642ORF1591P (98% identity) | GATC | M.UbaMDORFL6P |
| ??? | M | M.EsaRM4ORFAP (98% identity) | M.UbaMDORFM6P | |
| ??? | M | M1.Tye11347ORF378P (41% identity) | M.UbaMDORFN6P | |
| ??? | M | M.Ssp206084ORFCP (44% identity) | GTCGAC | M.UbaMDORFO6P |
| ??? | R | TfoKS16ORF325P (65% identity) | CTAG | UbaMDORFS6P |
| ??? | M | M.Ste4838ORF53840P (19% identity) | M.UbaMDORFT6P | |
| ??? | M | M.Cdi30642ORF879P (99% identity) | CATG | M.UbaMDORFU6P |
| ??? | R | Tye11347ORF735P (67% identity) | CCGG | UbaMDORFW6P |
| ??? | M | M.Nba55ORF7820P (20% identity) | M.UbaMDORFW6P | |
| ??? | M | M.UbaMDORFR11P (88% identity) | GTAC | M.UbaMDORFY6P |
| ??? | M | M.UbaMDORFP9P (84% identity) | M.UbaMDORFZ6P | |
| ??? | M | M.UbaMDORFA8P (42% identity) | CATG | M.UbaMDORFA7P |
| ??? | RM | LfeYSKORF3470P (31% identity) | UbaMDORFO9P | |
| ??? | M | M.UbaMDORFZ6P (84% identity) | M.UbaMDORFP9P | |
| ??? | M | M.UbaMDORFW10P (70% identity) | AAGCTT | M.UbaMDORFQ9P |
| ??? | 384 aa hypothetical protein HRED_02101 | |||
| ??? | 466 aa hypothetical protein N47_A11650 | |||
| ??? | RM | EsaRM18ORFAP (31% identity) | UbaMDORFR9P | |
| ??? | M | M.HspN12ORF4455BP (37% identity) | M.UbaMDORFS9P | |
| ??? | M | M.UbaMDORFN11P (66% identity) | M.UbaMDORFT9P | |
| ??? | M | M.UbaMDORFQ10P (82% identity) | CGCG | M.UbaMDORFU9P |
| ??? | R | EsaRM67ORFAP (76% identity) | CGCG | UbaMDORFU9P |
| ??? | RM | CdiPM4ORF1427P (49% identity) | UbaMDORFW9P | |
| ??? | RM | LfeYSKORF3470P (60% identity) | UbaMDORFX9P | |
| ??? | RM | LspCF1ORF11740P (55% identity) | UbaMDORFY9P | |
| ??? | M | M.Nsp5002ORFAP (56% identity) | AATT | M.UbaMDORFZ9P |
| ??? | RM | UbaMDORFV8P (39% identity) | UbaMDORFC10P | |
| ??? | 626 aa hypothetical protein Faci_07171 | |||
| ??? | M | M.TarBDKEORF1485P (74% identity) | GATC | M.UbaMDORFH10P |
| ??? | RM | LspCF1ORF90P (80% identity) | UbaMDORFI10P | |
| ??? | RM | EsaRM15ORFAP (65% identity) | UbaMDORFL10P | |
| ??? | RM | UarASSA1ORF3305P (34% identity) | UbaMDORFM10P | |
| ??? | M | M.Tsp2015ORF4340P (50% identity) | GATC | M.UbaMDORFN10P |
| ??? | M | M.Mre10914I (38% identity) | GATC | M.UbaMDORFO10P |
| ??? | DNA methylase N-4/N-6 domain-containing protein | |||
| ??? | M | M.EsaRM67ORFAP (85% identity) | CGCG | M.UbaMDORFQ10P |
| ??? | M | M.UarASSA1ORF5870P (58% identity) | CTNAG | M.UbaMDORFP10P |
| ??? | 316 aa hypothetical protein Ta0829 | |||
| ??? | DNA methylase | |||
| ??? | M | M.Cje11951ORF280P (60% identity) | TTTAAA | M.UbaMDORFS10P |
| ??? | M | M.UbaMDORFU7P (99% identity) | CTSAG | M.UbaMDORFR10P |
| ??? | DNA methylase | |||
| ??? | M | M.EsaRM72ORFAP (99% identity) | M.UbaMDORFT10P | |
| ??? | M | 364 aa hypothetical protein N47_A11650 | AAGCTT | M.UbaMDORFW10P |
| ??? | M | M.TarAORFEP (53% identity) | M.UbaMDORFX10P | |
| ??? | M | M.Tsp2015ORF1625P (38% identity) | M.UbaMDORFY10P | |
| ??? | R | Mph29WORFAP (28% identity) | CTAG | UbaMDORFA11P |
| ??? | M | M.AcoALE1ORF4030P (44% identity) | GATC | M.UbaMDORFC11P |
| ??? | M | M.LspUBAORFAP (100% identity) | CTCGAG | M.UbaMDORFF11P |
| ??? | R | LspUBAORFAP (100% identity) | CTCGAG | UbaMDORFF11P |
| ??? | M | M.TarAORFAP (50% identity) | M.UbaMDORFH11P | |
| ??? | T/G-specific DNA glycosylase | |||
| ??? | M | M.CalB3ORFDP (52% identity) | M.UbaMDORFJ11P | |
| ??? | M | DNA-cytosine methyltransferase | GCCGGC | M.UbaMDORFK11P |
| ??? | RM | Nga92ORF22680P (21% identity) | UbaMDORFL11P | |
| ??? | RM | CdiPM4ORF1760P (90% identity) | UbaMDORFM11P | |
| ??? | M | M.UbaMDORFT9P (66% identity) | M.UbaMDORFN11P | |
| ??? | M | M.UbaMDORFM7P (95% identity) | GTAC | M.UbaMDORFR11P |
| ??? | M | M1.UbaMDORFI8P (98% identity) | M.UbaMDORFT11P | |
| ??? | DNA adenine methylase | |||
| ??? | M | M.UbaMDORFT11P (98% identity) | M1.UbaMDORFI8P | |
| ??? | R | type II restriction enzyme | UbaMDORFI8P | |
| ??? | M | M2.Tye11347ORF378P (58% identity) | M2.UbaMDORFI8P | |
| ??? | M | M.FacFer1ORF350P (27% identity) | M.UbaMDORFH8P | |
| ??? | modification methylase | |||
| ??? | M | M.UbaMDORFPP (34% identity) | TCTAGA | M.UbaMDORFK8P |
| ??? | M | M.UarASSA1ORF1750P (43% identity) | CATG | M.UbaMDORFN8P |
| ??? | RM | TvoORF681P (75% identity) | UbaMDORFV8P | |
| ??? | M | M.CdiPM4ORF587P (100% identity) | M.UbaMDORFY8P | |
| ??? | M | M.PmaEXORF251P (38% identity) | M.UbaMDORFX8P | |
| ??? | V | V.Dsa435ORF13170P (24% identity) | V.UbaMDORFX8P | |
| ??? | M | M.TarAORFEP (32% identity) | M.UbaMDORFZ8P | |
| ??? | M | M.AviSDU34ORF50465P (25% identity) | M.UbaMDORFA9P | |
| ??? | M | M.Cba4G11ORF1388P (18% identity) | AAGCTT | M.UbaMDORFB9P |
| ??? | M | M.UbaMDORFE9P (76% identity) | CTAG | M.UbaMDORFC9P |
| ??? | M | M.UbaMDORFE9P (85% identity) | CTAG | M.UbaMDORFD9P |
| ??? | M | M.UbaMDORFD9P (85% identity) | CTAG | M.UbaMDORFE9P |
| ??? | M | M.UbaMDORFE9P (93% identity) | CTAG | M.UbaMDORFF9P |
| ??? | R | NspKC1ORF1870P (26% identity) | GANTC | UbaMDORFG9P |
| ??? | M | DNA methylase N-4/N-6 domain protein | CTAG | M.UbaMDORFH9P |
| ??? | M | DNA methylase N-4/N-6 domain-containing protein | M.UbaMDORFI9P | |
| ??? | M | M.UbaMDORFK9P (56% identity) | CGWCG | M.UbaMDORFJ9P |
| ??? | R | 97 aa conserved hypothetical protein | CGWCG | UbaMDORFJ9P |
| ??? | M | M.Dli5ac10ORF40080P (56% identity) | CGWCG | M.UbaMDORFK9P |
| ??? | R | CthsBORF11955P (53% identity) | RGATCY | UbaMDORFL9P |
| ??? | M | M.LsaKIBI1ORFBP (53% identity) | RGATCY | M.UbaMDORFL9P |
| ??? | M | M.EsaRM22ORFAP (85% identity) | M.UbaMDORFD7P | |
| ??? | M | Modification methylase MvaI | CCWGG | M.UbaMDORFF7P |
| ??? | M | gp61 | M.UbaMDORFJ7P | |
| ??? | M | M.UbaMDORFO7P (37% identity) | M1.UbaMDORFK7P | |
| ??? | M | DNA methylase N-4/N-6 domain-containing protein | M2.UbaMDORFK7P | |
| ??? | M | adenine specific DNA methyltransferase | GANTC | M.UbaMDORFL7P |
| ??? | R | UbaMDORFV1P (36% identity) | GTAC | UbaMDORFM7P |
| ??? | M | M.UbaMDORFR11P (95% identity) | GTAC | M.UbaMDORFM7P |
| ??? | M | M.Tsp2015ORF5325P (32% identity) | CCWGG | M.UbaMDORFN7P |
| ??? | M | M1.UbaMDORFK7P (37% identity) | GGCC | M.UbaMDORFO7P |
| ??? | M | cytosine-specific DNA methylotransferase | GGCC | M.UbaMDORFP7P |
| ??? | RM | Apa233ORF8420P (20% identity) | UbaMDORFR7P | |
| ??? | S | S.Eco3033ORFMP (27% identity) | S.UbaMDORFR7P | |
| ??? | M | DNA modification methylase | AAGCTT | M.UbaMDORFS7P |
| ??? | M | M.UbaMDORFS7P (71% identity) | AAGCTT | M.UbaMDORFT7P |
| ??? | DNA methylase | |||
| ??? | M | M.UbaMDORFS10P (39% identity) | TTTAAA | M.UbaMDORFV7P |
| ??? | M | M.UbaMDORFR10P (99% identity) | CTSAG | M.UbaMDORFU7P |
| ??? | DNA methylase | |||
| ??? | RM | UbaMDORFV4P (29% identity) | UbaMDORFB3P | |
| ??? | RM | UbaMDORFY7P (61% identity) | UbaMDORFX7P | |
| ??? | RM | UbaMDORFX7P (61% identity) | UbaMDORFY7P | |
| ??? | M | M.FacFer1ORF1436P (45% identity) | GATC | M.UbaMDORFZ7P |
| ??? | DNA methylase N-4/N-6 domain-containing protein | |||
| ??? | site-specific DNA methylase | |||
| ??? | M | M.TarIpORFEP (42% identity) | CATG | M.UbaMDORFA8P |
| ??? | R | CyoLORF13310P (38% identity) | GCWGC | UbaMDORFB8P |
| ??? | M | M.Nar67ORF3085P (56% identity) | GCSGC | M.UbaMDORFC8P |
| ??? | RM | UbaMDORFM11P (47% identity) | UbaMDORFD8P | |
| ??? | RM | TspSY098ORF7205P (26% identity) | UbaMDORFE8P | |
| ??? | M | M.UbaMDORFQ10P (43% identity) | CGCG | M.UbaMDORFF8P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.UbaMDORFS11P (24% identity) | M.UbaMDORFAP | |
| ??? | R | TarIpORFDP (19% identity) | UbaMDORFIP | |
| ??? | M | 62 aa hypothetical protein | M.UbaMDORFIP | |
| ??? | R | UbaMDORFS11P (10% identity) | UbaMDORFKP | |
| ??? | R | CdiPM4ORF53P (28% identity) | UbaMDORFXP | |
| ??? | R | XauORF547P (26% identity) | UbaMDORFJ1P | |
| ??? | M | M.CdiPM4ORF53P (51% identity) | M.UbaMDORFR1P | |
| ??? | M | M.UarASSA1ORF2320P (18% identity) | M.UbaMDORFW1P | |
| ??? | R | AspCfxKORF740P (15% identity) | UbaMDORFG2P | |
| ??? | M | M.UbaMSORFS24P (22% identity) | M.UbaMDORFG2P | |
| ??? | M | M.EsaRM26ORFAP (35% identity) | M.UbaMDORFS2P | |
| ??? | R | CdiPM4ORF53P (26% identity) | UbaMDORFQ3P | |
| ??? | M | M.UbaMDORFP8P (30% identity) | M.UbaMDORFR3P | |
| ??? | R | SazAORF1308P (16% identity) | UbaMDORFE4P | |
| ??? | R | EsaRM14ORFAP (21% identity) | UbaMDORFF4P | |
| ??? | M | M.EsaRM14ORFAP (84% identity) | M.UbaMDORFF4P | |
| ??? | M | M.EsaRM36ORFAP (28% identity) | M.UbaMDORFJ4P | |
| ??? | R | EsaRM26ORFAP (41% identity) | UbaMDORFQ4P | |
| ??? | M | M.UbaMDORFQ11P (41% identity) | M.UbaMDORFA5P | |
| ??? | R | Ppa10489ORF18030P (50% identity) | UbaMDORFG5P | |
| ??? | R | UbaMDORFZ10P (62% identity) | UbaMDORFH5P | |
| ??? | M | M.KmeB1ORF2920P (32% identity) | M.UbaMDORFS5P | |
| ??? | M | M.Ran421ORF1645P (21% identity) | M.UbaMDORFT5P | |
| ??? | M | M.UbaMDORFZ10P (45% identity) | M.UbaMDORFA6P | |
| ??? | M | M.TarIpORFDP (83% identity) | M.UbaMDORFE6P | |
| ??? | M | M.EsaRM9ORFAP (100% identity) | M.UbaMDORFQ6P | |
| ??? | R | UbaMDORFS11P (47% identity) | UbaMDORFQ6P | |
| ??? | M | M.EsaRM26ORFAP (72% identity) | M.UbaMDORFV6P | |
| ??? | R | AbaRan1ORF951P (30% identity) | UbaMDORFV6P | |
| ??? | M | M.CdiPM4ORF53P (40% identity) | M.UbaMDORFX6P | |
| ??? | R | CdiPM4ORF53P (66% identity) | UbaMDORFX6P | |
| ??? | R | EsaRM27ORFAP (85% identity) | UbaMDORFB10P | |
| ??? | modification methylase | |||
| ??? | M | M.UbaMDORFQ11P (91% identity) | M.UbaMDORFD10P | |
| ??? | R | UbaMDORFV10P (14% identity) | UbaMDORFD10P | |
| ??? | M | M.UbaMDORFD10P (51% identity) | M.UbaMDORFE10P | |
| ??? | M | M.Mar14ORF869P (92% identity) | M.UbaMDORFF10P | |
| ??? | R | UbaMDORFQ11P (85% identity) | UbaMDORFV10P | |
| ??? | M | M.UbaMDORFA6P (45% identity) | M.UbaMDORFZ10P | |
| ??? | R | Cdi30642ORF1792P (65% identity) | UbaMDORFZ10P | |
| ??? | R | CdiPM4ORF53P (84% identity) | UbaMDORFB11P | |
| ??? | M | M.CdiPM4ORF53P (67% identity) | M.UbaMDORFB11P | |
| ??? | M | M.Mar14ORF869P (73% identity) | M.UbaMDORFG11P | |
| ??? | R | Mar14ORF869P (43% identity) | UbaMDORFG11P | |
| ??? | M | M.SspM195ORF10755P (20% identity) | M.UbaMDORFI11P | |
| ??? | R | PmeBin29ORFDP (10% identity) | UbaMDORFP11P | |
| ??? | R | UbaMDORFV10P (85% identity) | UbaMDORFQ11P | |
| ??? | M | M.UbaMDORFD10P (91% identity) | M.UbaMDORFQ11P | |
| ??? | R | EsaRM14ORFAP (95% identity) | UbaMDORFS11P | |
| ??? | M | M.TvoORF2167P (87% identity) | M.UbaMDORFS11P | |
| ??? | M | M.UbaMDORFR3P (30% identity) | M.UbaMDORFP8P | |
| ??? | R | Cdi30642ORF1792P (76% identity) | UbaMDORFP8P | |
| ??? | R | Cdi30642ORF1792P (49% identity) | UbaMDORFT8P | |
| ??? | M | M.UbaMDORFS5P (22% identity) | M.UbaMDORFE7P | |
| ??? | M | M.SmcB1ORF1487P (12% identity) | M.UbaMDORFG7P | |
| ??? | M | M.EsaRM11ORFAP (69% identity) | M.UbaMDORFH7P | |
| ??? | M | M.UbaMDORFH7P (42% identity) | M.UbaMDORFI7P | |
| ??? | M | M.UbaMDORFQ11P (23% identity) | M.UbaMDORFG8P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Tin15286ORF1505P (13% identity) | UbaMDORFY2P | |
| ??? | R | MspC1S70McrB2P (28% identity) | UbaMDMcrBP | |
| ??? | R | helicase | UbaMDORFS4P | |
| ??? | R | helicase | UbaMDORFB6P | |
| ??? | R | LfeSpCORFCP (37% identity) | UbaMDORFH6P | |
| ??? | R | Mrr restriction endonuclease | UbaMDMrrP | |
| ??? | R | EsaRM25MrrP (74% identity) | UbaMDMrr2P | |
| ??? | R | OspHL35ORFCP (20% identity) | UbaMDORFM9P | |
| ??? | R | CdiPM4ORF90P (97% identity) | UbaMDORFK10P | |
| ??? | R | Restriction endonuclease | UbaMDMrr4P | |
| ??? | probable restriction endonuclease, S subunit | |||
| ??? | R | LfeYSKMrrP (99% identity) | UbaMDMrr5P | |
| ??? | hypothetical protein | |||
| ??? | R | LfeJBORFAP (100% identity) | UbaMDORFQ8P | |
| ??? | R | Msp7AreMrrP (37% identity) | UbaMDMrr3P | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.PspAB48ORF15765P (50% identity) | GATC | M.UbaMDORFX2P |