Vibrio mimicus VM223 |
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Putative Vibrio mimicus VM223 RM systems
Ref: Hasan,N.A. et al. Proc. Natl. Acad. Sci. U.S.A. 107 (49), 21134-21139 (2010)
REBASE ref # 13927
Contig set: 4,347,971 bp
GenBank #: ADAJ00000000 (NZ_ADAJ00000000)
REBASE acronym: Vmi223
Org_num: 8482
All begin VMA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1752 | transcriptional regulator | |||
| 1753 | R | VchsE1ORF8815P (99% identity) | Vmi223ORF1755P | |
| 1754 | Na(+) driven multidrug efflux pump | |||
| 1755 | M | M.VchPS4ORF8330P (96% identity) | M.Vmi223ORF1755P | |
| 1756 | S | S.VvuB2ORFBP (65% identity) | S.Vmi223ORF1755P | |
| 1757 | 249 aa conserved hypothetical protein | |||
| 2597 | 313 aa hypothetical protein | |||
| 2598 | M | M.VpaK23ORF9430P (97% identity) | M.Vmi223ORF2598P | |
| 2599 | S | S.Cyo13708I (53% identity) | S.Vmi223ORF2598P | |
| 2600 | R | VpaK23ORF9430P (99% identity) | Vmi223ORF2598P | |
| 2601 | pore-forming cytotoxin integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 89 | hcp | |||
| ??? | R | VchFL14ORF17800P (17% identity) | CTGCAG | Vmi223ORFAP |
| 90 | methyl-accepting chemotaxis protein/sensory box | |||
| 495 | phage integrase | |||
| 496 | RM | VciF8054ORFAP (99% identity) | Vmi223ORF496P | |
| 497 | protein of unknown function DUF955 | |||
| 3106 | ribulose-phosphate 3-epimerase | |||
| 3107 | M | M.Vmi451DamP (99% identity) | GATC | M.Vmi223DamP |
| 3108 | DamX-related protein | |||
| 1763 | 212 aa hypothetical protein | |||
| ??? | R | VchFL14ORF17800P (17% identity) | CTGCAG | Vmi223ORFAP |
| 1764 | hcp | |||