Raphidiopsis brookii D9 |
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Putative Raphidiopsis brookii D9 RM systems
Ref: Stucken,K. et al. PLoS ONE 5 (2), E9235 (2010)
REBASE ref # 13887
Contig set: 3,186,511 bp
GenBank #: ACYB00000000 (NZ_ACYB00000000)
REBASE acronym: RbrD9
Org_num: 8158
All begin CRD_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | CraCYLPORFGP (92% identity) | RbrD9ORF1P | |
| 3 | 252 aa hypothetical protein | |||
| 38 | Serine/Threonine protein kinase | |||
| ??? | RM | CraCYRFORFKP (70% identity) | RbrD9ORFAP | |
| 39 | 79 aa hypothetical protein | |||
| 69 | Oxidoreductase-like protein | |||
| 70 | M | M.CraKLL07ORF10800P (85% identity) | GGCC | M.RbrD9ORF70P |
| 71 | Hemerythrin HHE cation binding region protein | |||
| 248 | RM | CraCC14ORF13515P (92% identity) | RbrD9ORF248P | |
| 249 | Dephospho-CoA kinase | |||
| ??? | M | 269 aa hypothetical protein NEIFLAOT_01953 | GATC | M.RbrD9ORFBP |
| 868 | Serine/Threonine protein kinase | |||
| 577 | 1413 aa hypothetical protein | |||
| ??? | RM | RbrD9ORFAP (54% identity) | RbrD9ORFCP | |
| 578 | Alpha-amylase | |||
| 2265 | 103 aa hypothetical protein | |||
| 2266 | M | M.CraCYRFORFGP (89% identity) | M.RbrD9ORF2266P | |
| 2267 | 100 aa hypothetical protein | |||
| 2200 | Nitroreductase | |||
| ??? | RM | CraA1ORFGP (91% identity) | RbrD9ORF2201P | |
| 2206 | 182 aa hypothetical protein | |||
| 2057 | Glycosyl hydrolase, BNR repeat protein | |||
| 2058 | M | M.CraCC14ORF5675P (99% identity) | CGATCG | M.RbrD9ORF2058P |
| 2059 | 175 aa conserved hypothetical protein | |||
| 658 | Ferric uptake regulator (FUR) family | |||
| 659 | RM | Ski73ORF22080P (87% identity) | RbrD9ORF659P | |
| 660 | Cobaltochelatase, CobN subunit | |||
| 699 | DEAD/DEAH box helicase domain protein | |||
| ??? | RM | CraA1ORFHP (90% identity) | RbrD9ORF700P | |
| 703 | Superfamily II DNA/RNA helicases, SNF2 family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1127 | 357 aa hypothetical protein | |||
| 1128 | R | 520 aa hypothetical protein | RbrD9McrBP | |