Pediococcus claussenii |
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Putative Pediococcus claussenii RM systems
Ref: Pittet,V. et al. unpublished
REBASE ref # 13916
| Sequence length: | GenBank #: | |
| Chromosome: | 1,829,111 bp | CP003137 |
| plasmid pPECL-3: | 17,830 bp | CP003140 |
| plasmid pPECL-7: | 16,067 bp | CP003144 |
| plasmid pPECL-8: | 33,246 bp | CP003145 |
REBASE acronym: Pcl344
Org_num: 8299
All begin PECL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPECL-3 | ||||
| 1985 | Transposase, IS30 family | |||
| 1986 | S | S.Lla90I (55% identity) | S.Pcl344ORF1986P | |
| 1987 | pyridine nucleotide-disulfide oxidoreductase | |||
| plasmid pPECL-7 | ||||
| 1996 | type III restriction/modification enzyme | |||
| 1995 | S | S.Lma3596ORFGP (71% identity) | S.Pcl344ORF1995P | |
| 1994 | plasmid replication initiation protein | |||
| plasmid pPECL-8 | ||||
| 1964 | transcriptional regulator, Xre family | |||
| 1966 | R | Pcl254ORF9710P (100% identity) | Pcl344ORF1967P | |
| 1967 | M | M.Lba1991II (98% identity) | M.Pcl344ORF1967P | |
| 1969 | S | S.Pcl254ORF9710P (100% identity) | S.Pcl344ORF1967P | |
| 2031 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1721 | transposase | |||
| 1722 | R | Pcl254ORF3520P (100% identity) | GGATG | Pcl344ORF1723P |
| 1723 | M | M.Pcl254ORF3520P (100% identity) | GGATG | M.Pcl344ORF1723P |
| 2018 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pPECL-7 | ||||
| 1997 | glycosyl transferase, family 2 | |||
| 1996 | M | M.LfeHFD1ORF1379P (23% identity) | M.Pcl344ORF1996P | |
| 1995 | 200 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29 | 222 aa hypothetical protein | |||
| 30 | R | Pcl254ORF4340P (100% identity) | Pcl344ORFAP | |
| 31 | metallo-beta-lactamase superfamily protein | |||