Azospirillum lipoferum 4B |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Azospirillum lipoferum 4B RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
| Sequence length: | GenBank #: | |
| Chromosome: | 2,988,332 bp | FQ311868 |
| plasmid AZO_p1: | 1,040,425 bp | FQ311869 |
| plasmid AZO_p4: | 645,253 bp | FQ311872 |
REBASE acronym: Ali4B
Org_num: 7963
All begin AZOLI_, AZOLI_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2056 | protein of unknown function | |||
| 2057 | R | BbeWBOS08ORF11010P (57% identity) | Ali4BORF2059P | |
| 2058 | S | S.Rgi145I (35% identity) | S.Ali4BORF2059P | |
| 2059 | M | M.CspsS6ORF14130P (66% identity) | M.Ali4BORF2059P | |
| 2060 | Partial transposase, IS256 family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2405 | protein of unknown function | |||
| 2406 | RM | AspB510ORF3480P (74% identity) | Ali4BORF2406P | |
| 2407 | protein of unknown function | |||
| 2455 | haloacid dehydrogenase | |||
| 2456 | M | M.AhuZ5ORF9720P (98% identity) | RGATCY | M.Ali4BORF2456P |
| 2457 | transcriptional regulator, Crp/Fnr | |||
| plasmid AZO_p1 | ||||
| 10154 | protein of unknown function | |||
| 10155 | RM | MspJR02ORF9315P (52% identity) | Ali4BORF10155P | |
| 10156 | conserved protein of unknown function | |||
| 10436 | protein of unknown function | |||
| 10437 | V | V.MspPchSORF6970P (67% identity) | V.Ali4BORF10441P | |
| 10438 | R | R2.Atu5ORF10180P (70% identity) | GTCGAC | Ali4BORF10441P |
| 10440 | Conserved protein of unknown function | |||
| 10441 | M | M.PspA1852ORF17255P (71% identity) | GTCGAC | M.Ali4BORF10441P |
| 10442 | protein of unknown function | |||
| 10449 | Mu-like prophage host-nuclease | |||
| 10450 | M | M.AhuZ5ORFBP (97% identity) | M.Ali4BORF10450P | |
| 10451 | protein of unknown function | |||
| plasmid AZO_p4 | ||||
| 40328 | ribonuclease HII | |||
| 40329 | M | M.AhuZ5ORFDP (65% identity) | GANTC | M.Ali4BORF40329P |
| 40330 | dihydroneopterin aldolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2086 | protein of unknown function; putative | |||
| 2088 | R | AspTSH100ORF15065P (97% identity) | Ali4BORF2088P | |
| 2089 | conserved protein of unknown function | |||
| 2089 | conserved protein of unknown function | |||
| 2090 | M | M.AspTSH100ORF15065P (52% identity) | M.Ali4BORF2090P | |
| 2091 | conserved protein of unknown function | |||