Escherichia coli 'clone D i2' |
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Putative Escherichia coli 'clone D i2' RM systems
Ref: Reeves,P.R. et al. PLoS ONE 6 (10), E26907 (2011)
REBASE ref # 13701
Complete sequence: 5,038,386 bp
GenBank #: CP002211
REBASE acronym: EcoDi2
Org_num: 7891
All begin i02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4939 | endoribonuclease SymE | |||
| 4940 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoDi2ORF4941P |
| 4941 | M | M.EcoDi14ORF4941P (100% identity) | GAGNNNNNNNGTCA | M.EcoDi2ORF4941P |
| 4942 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoDi2ORF4941P |
| 4943 | 557 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1389 | 146 aa hypothetical protein | |||
| 1390 | M | M.EcoS88ORF1179P (100% identity) | GATC | M.EcoDi2ORF1390P |
| 1391 | 127 aa hypothetical protein | |||
| 2191 | 306 aa hypothetical protein | |||
| 2192 | V | V.EcosC25DcmP (100% identity) | V.EcoDi2DcmP | |
| 2193 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoDi2DcmP |
| 2194 | 225 aa hypothetical protein | |||
| 3709 | DNA-binding protein Fis | |||
| 3710 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoDi2ORF3710P |
| 3711 | 68 aa hypothetical protein | |||
| 3828 | ribulose-phosphate 3-epimerase | |||
| 3829 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoDi2DamP |
| 3830 | 428 aa hypothetical protein | |||
| 4876 | ATPase-like protein | |||
| 4877 | RM | Kpn24835ORF14810P (100% identity) | EcoDi2ORF4877P | |
| 4878 | 865 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4891 | prophage P4 integrase | |||
| 4892 | R | EcoUTI89IP (100% identity) | CACAG | EcoDi2ORF4893P |
| 4893 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoDi2ORF4893P |
| 4894 | 114 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4937 | 306 aa hypothetical protein | |||
| 4938 | R | EcoKE51GmrSDP (100% identity) | EcoDi2GmrSDP | |
| 4939 | endoribonuclease SymE | |||