Clostridium kluyveri DSM 555 |
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Putative Clostridium kluyveri DSM 555 RM systems
Ref: Seedorf,H. et al. Proc. Natl. Acad. Sci. U.S.A. 105 (6), 2128-2133 (2008)
REBASE ref # 10449
| Sequence length: | GenBank #: | |
| Chromosome: | 3,964,618 bp | CP000673 (NC_009706) |
| plasmid pCKL555A: | 59,182 bp | CP000674 (NC_009466) |
REBASE acronym: Ckl
Org_num: 4823
All begin CKL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2594 | Integrase-related protein | |||
| 2595 | S | S.CklAORF2301P (97% identity) | S.CklORF2595P | |
| 2596 | R | CklAORF2301P (100% identity) | CklORF2595P | |
| 2597 | Type I restriction enzyme, methylase subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1888 | 134 aa Hypothetical protein | |||
| 1889 | M | M.CklORF1987P (100% identity) | M.CklORF1889P | |
| 1891 | 55 aa Hypothetical protein | |||
| 1986 | 134 aa Hypothetical protein | |||
| 1987 | M | M.CklORF1889P (100% identity) | M.CklORF1987P | |
| 1988 | 55 aa Hypothetical protein | |||
| 2313 | 280 aa Conserved hypothetical protein | |||
| 2314 | M | M.CklAORF2036P (100% identity) | GATC | M.CklORF2314P |
| 2315 | 40 aa Hypothetical protein | |||
| 2331 | AspA2 | |||
| 2332 | RM | CklAORF2052P (99% identity) | CklORF2332P | |
| 2333 | 111 aa Hypothetical protein | |||
| 2648 | 262 aa Conserved hypothetical protein | |||
| 2649 | M | M.Eca2594ORF42740P (99% identity) | M.CklORF2649P | |
| 2650 | MetK2 | |||
| 2668 | 622 aa Conserved hypothetical protein | |||
| 2669 | C | C.RspMA18ORF16400P (100% identity) | C.CklORF2671P | |
| 2670 | R | CklAORF2367P (100% identity) | CCGG | CklORF2671P |
| 2671 | M | M.CklAORF2367P (99% identity) | CCGG | M.CklORF2671P |
| 2672 | Predicted RNA methyltransferase | |||
| 2693 | Predicted permease | |||
| 2694 | RM | CklAORF2389P (100% identity) | CklORF2694P | |
| 2695 | Predicted efflux pump | |||
| 2937 | 241 aa Hypothetical protein | |||
| 2938 | M | M.CklAORF2604P (100% identity) | ACNNNNNCTCC | M.CklORF2938P |
| 2939 | Type I specificity subunit-related protein | |||
| 3157 | SpeE | |||
| 3158 | M | M.CklAORF2796P (97% identity) | M.CklORF3158P | |
| 3159 | Predicted polysaccharide deacetylase | |||
| 3291 | 72 aa Hypothetical protein | |||
| 3292 | M | M1.CklAORF2908P (100% identity) | M1.CklORF3292P | |
| 3293 | 106 aa Hypothetical protein | |||
| 3294 | M | M2.CklAORF2908P (100% identity) | M2.CklORF3292P | |
| 3295 | Predicted DNA helicase | |||
| 3896 | 143 aa Conserved hypothetical protein | |||
| 3897 | M | M.CklAORF3440P (100% identity) | M.CklORF3897P | |
| 3898 | 196 aa Conserved hypothetical protein | |||
| plasmid pCKL555A | ||||
| 4007 | 142 aa hypothetical protein | |||
| ??? | M | M.CklAORF33P (99% identity) | TGGCCA | M.CklORF4008P |
| 4010 | 53 aa hypothetical protein | |||
| 4047 | 69 aa hypothetical protein | |||
| 4048 | M | M.CklAORF10P (100% identity) | M.CklORF4048P | |
| 4049 | phage related protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3237 | 106 aa Hypothetical protein | |||
| 3238 | C | C.WspWK01ORF5540P (100% identity) | C.CklORF3239P | |
| 3239 | M | M.CklAORF2865P (99% identity) | M.CklORF3239P | |
| 3240 | R | CklAORF2865P (99% identity) | CklORF3239P | |
| 3241 | Predicted ATP-dependent endonuclease | |||