Alkaliphilus metalliredigens QYMF |
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Putative Alkaliphilus metalliredigens QYMF RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 23100
Complete sequence: 4,929,566 bp
GenBank #: CP000724 (NC_009633)
REBASE acronym: AmeQ
Org_num: 4789
All begin Amet_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 846 | 651 aa hypothetical protein | |||
| 847 | R | Fsp3D3ORF1181P (81% identity) | AmeQORF848P | |
| 848 | M | M.Fsp3D3ORF1181P (88% identity) | M.AmeQORF848P | |
| 849 | S | S.CcaPORF573P (41% identity) | S.AmeQORF848P | |
| 850 | SMC domain protein | |||
| 1606 | 74 aa hypothetical protein | |||
| 1607 | M | M.Cbe791ORF14350P (72% identity) | M.AmeQORF1607P | |
| 1608 | S | S.LbrM10ORF11955P (47% identity) | S.AmeQORF1607P | |
| 1609 | R | PmeH2ORF30205P (74% identity) | AmeQORF1607P | |
| 3299 | Rhodanese domain protein | |||
| 3300 | R | protein of unknown function DUF450 | AmeQORF3304P | |
| 3301 | 335 aa conserved hypothetical protein | |||
| 3302 | 67 aa conserved hypothetical protein | |||
| 3303 | S | S.Psp172198ORF3649P (38% identity) | S.AmeQORF3304P | |
| ??? | M | DNA methyltransferase | M.AmeQORF3304P | |
| 3305 | TrkA-N domain protein | |||
| 4055 | protein of unknown function DUF45 | |||
| 4056 | R | BprPMF1ORF2257P (91% identity) | AmeQORF4058P | |
| 4057 | S | S.Aba9ORF4065P (52% identity) | S.AmeQORF4058P | |
| 4058 | M | M.Cdi114ORFCP (80% identity) | M.AmeQORF4058P | |
| 4059 | 70 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2439 | 82 aa hypothetical protein | |||
| 2440 | M | M.Cac1496ORF15910P (75% identity) | M.AmeQORF2440P | |
| 2441 | 210 aa conserved hypothetical cytosolic protein | |||
| 2581 | 63 aa hypothetical protein | |||
| 2582 | M | M.EacORF1650P (58% identity) | M.AmeQORF2582P | |
| 2583 | sigma factor | |||
| 3063 | 226 aa hypothetical protein | |||
| 3064 | RM | GfeIRF9ORF2455P (29% identity) | AmeQORF3064P | |
| 3065 | 226 aa hypothetical protein | |||
| 4038 | virulence-related protein | |||
| 4039 | M | M.ErhZJORF1015P (97% identity) | M.AmeQORF4039P | |
| 4040 | Methionine adenosyltransferase | |||