Flavobacterium psychrophilum JIP02/86 |
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Putative Flavobacterium psychrophilum JIP02/86 RM systems
Ref: Duchaud,E. et al. Nat. Biotechnol. 25 (7), 763-769 (2007)
REBASE ref # 10180
Complete sequence: 2,860,382 bp
GenBank #: AM398681 (NC_009613)
REBASE acronym: FpsJ
Org_num: 4803
All begin FP
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26 | 3-oxoacid CoA-transferase subunit A family | |||
| 27 | RM | FpsVQ50ORF135P (100% identity) | FpsJORF27P | |
| 28 | Protein of unknown function | |||
| 245 | DNA-damage-inducible protein D | |||
| 246 | RM | FpsVQ50ORF1235P (100% identity) | FpsJORF246P | |
| 247 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 734 | tRNA (uracil-5-)-methyltransferase | |||
| 735 | C | C.FpsVQ50ORF3755P (100% identity) | C.FpsJIVP | |
| 736 | M | M.FpsVQ50ORF3755P (100% identity) | GATC | M.FpsJIV |
| 737 | Protein of unknown function | |||
| 856 | Probable two-component system sensor histidine | |||
| 857 | C | C.FpsVQ50ORF4080P (100% identity) | C.FpsJVP | |
| 858 | M | M.FpsVQ50ORF4080P (100% identity) | CGCG | M.FpsJV |
| 859 | R | FpsVQ50ORF4080P (100% identity) | CGCG | FpsJVP |
| 860 | aminotransferase | |||
| 1565 | Protein of unknown function | |||
| 1566 | M | M.FpsVQ50ORF7630P (100% identity) | CTGAAG | M.FpsJIII |
| 1567 | RM | FpsVQ50ORF7630P (100% identity) | CTGAAG | FpsJIIIP |
| 1568 | C | C.FpsVQ50ORF7630P (100% identity) | C.FpsJIIIP | |
| 1569 | Protein of unknown function | |||
| 2148 | 75 aa Hypothetical protein | |||
| 2149 | R | FpsVQ50ORF10495P (100% identity) | CCNGG | FpsJVIP |
| 2150 | M | M.FpsV433ORF10530P (100% identity) | CCNGG | M.FpsJVI |
| 2151 | Probable transmembrane protein of unknown | |||
| 2272 | Probable ABC-type transport system, ATPase | |||
| 2273 | R | FpsVQ50ORF11250P (100% identity) | CCGG | FpsJI |
| 2274 | M | M.FpsVQ50ORF11250P (100% identity) | CCGG | M.FpsJI |
| 2275 | Protein of unknown function. Probably involved | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2166 | Protein of unknown function | |||
| 2167 | R | FpsVQ50ORF10650P (100% identity) | CGCAG | FpsJIIP |
| 2168 | RhuM protein | |||
| 2169 | M | M.FpsVQ50ORF10650P (100% identity) | CGCAG | M.FpsJII |
| 2170 | Protein of unknown function | |||