Bacteroides vulgatus ATCC 8482 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides vulgatus ATCC 8482 RM systems
Ref: Xu,J. et al. (er) PLoS Biol. 5 (7), E156 (2007)
REBASE ref # 10189
Complete sequence: 5,163,189 bp
GenBank #: CP000139 (NC_009614)
REBASE acronym: Bvu8482
Org_num: 4801
All begin BVU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3409 | ATP-dependent exonuclease V, alpha subunit - | |||
| 3410 | R | Pvu1098ORF11445P (100% identity) | Bvu8482ORF3413P | |
| 3411 | 601 aa conserved hypothetical protein | |||
| 3412 | S | S.Pvu1098ORF11445P (100% identity) | S.Bvu8482ORF3413P | |
| 3413 | M | M.Pvu1098ORF11445P (100% identity) | M.Bvu8482ORF3413P | |
| 3414 | 128 aa hypothetical protein | |||
| 3677 | transposase | |||
| 3678 | S | S1.Pdi244ORF10590P (58% identity) | S1.Bvu8482ORF3687P | |
| 3679 | 118 aa conserved hypothetical protein, putative | |||
| 3680 | 122 aa conserved hypothetical protein | |||
| 3681 | transposase | |||
| 3682 | S | S2.Msa17ORFA2P (100% identity) | S2.Bvu8482ORF3687P | |
| 3683 | S | S3.Pvu1098ORF10145P (62% identity) | S3.Bvu8482ORF3687P | |
| 3684 | S | S4.Msa17ORFA2P (96% identity) | S4.Bvu8482ORF3687P | |
| 3685 | S | S4.Pdi244ORF10590P (56% identity) | S5.Bvu8482ORF3687P | |
| 3686 | 470 aa conserved hypothetical protein | |||
| 3687 | M | M1.Pvu1098ORF10145P (100% identity) | M.Bvu8482ORF3687P | |
| 3688 | R | Pvu1098ORF10145P (100% identity) | Bvu8482ORF3687P | |
| 3689 | C | C.Pvu1098ORF10145P (100% identity) | C.Bvu8482ORF3687P | |
| 3690 | 454 aa conserved hypothetical protein | |||
| 4158 | 105 aa hypothetical protein | |||
| 4159 | S | S5.Pvu1098ORF7795P (100% identity) | S1.Bvu8482ORF4163AP | |
| 4160 | integrase | |||
| ??? | S | S3.PvuC06ORF3690P (100% identity) | S1.Bvu8482ORF4163BP | |
| 4161 | S | S2.Pvu1098ORF7795P (100% identity) | S2.Bvu8482ORF4163P | |
| 4162 | 376 aa conserved hypothetical protein | |||
| 4163 | M | M.Pvu201ORF22395P (100% identity) | M.Bvu8482ORF4163P | |
| 4164 | R | PvuC06ORF3690P (100% identity) | Bvu8482ORF4163P | |
| 4165 | 69 aa conserved hypothetical protein | |||
| 4164 | type I restriction enzyme EcoKI R protein | |||
| 4165 | C | C.Pvu201ORF22395P (100% identity) | C.Bvu8482ORF4165P | |
| 4166 | 275 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 954 | 80 aa conserved hypothetical protein | |||
| 955 | M | M.Pvu1098ORF1230P (100% identity) | M.Bvu8482ORF955P | |
| 956 | 123 aa hypothetical protein | |||
| 3741 | 1222 aa conserved hypothetical protein | |||
| 3742 | M | M.Pvu1098ORF9885P (100% identity) | M.Bvu8482ORF3742P | |
| 3743 | 525 aa conserved hypothetical protein | |||