Psychrobacter species PRwf-1 |
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Putative Psychrobacter species PRwf-1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10187
| Sequence length: | GenBank #: | |
| Chromosome: | 2,978,976 bp | CP000713 (NC_009524) |
| plasmid pRWF101: | 13,956 bp | CP000714 (NC_009516) |
REBASE acronym: PspPR
Org_num: 4722
All begin PsycPRwf_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1114 | protein of unknown function DUF45 | |||
| 1115 | R | PspYP14ORF5580P (99% identity) | PspPRORF1115P | |
| 1116 | 173 aa hypothetical protein | |||
| 1126 | phage integrase family protein | |||
| 1127 | M | N-6 DNA methylase | M.PspPRORF1127P | |
| 1128 | 157 aa hypothetical protein | |||
| 1324 | transcriptional regulator, LysR family | |||
| 1325 | R | Psp1501ORF1723P (96% identity) | PspPRORF1328P | |
| 1326 | 313 aa hypothetical protein | |||
| 1327 | S | S2.Vvu2444ORFCP (46% identity) | S.PspPRORF1328P | |
| 1328 | M | N-6 DNA methylase | M.PspPRORF1328P | |
| 1329 | 295 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 123 | 187 aa hypothetical protein | |||
| 124 | R | Pph10526ORF2333P (72% identity) | GATC | PspPRORF124P |
| 125 | aminodeoxychorismate lyase | |||
| plasmid pRWF101 | ||||
| 2392 | plasmid replicase | |||
| 2393 | RM | PspPRI (100% identity) | CCYCAG | PspPRORF2393P |
| 2394 | 188 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1352 | 94 aa hypothetical protein | |||
| 1353 | R | Pph10526McrCP (93% identity) | PspPRMcrC3P | |
| 1354 | R | 64 aa hypothetical protein | PspPRMcrB3P | |
| 1355 | transposase IS3/IS911 family protein | |||
| 1358 | Integrase, catalytic region | |||
| 1359 | R | PpaP01McrBP (55% identity) | PspPRMcrBP | |
| 1360 | 203 aa hypothetical protein | |||
| 1919 | choline/carnitine/betaine transporter | |||
| 1920 | R | PspG5ORF5370P (75% identity) | PspPRORF1920P | |
| 1921 | NUDIX hydrolase | |||
| 2029 | 344 aa hypothetical protein | |||
| 2030 | R | PspYP14McrCP (91% identity) | PspPRMcrC2P | |
| 2031 | R | PspFG1McrBP (99% identity) | PspPRMcrB2P | |
| 2032 | 230 aa hypothetical protein | |||