Pseudomonas putida F1 |
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Putative Pseudomonas putida F1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10173
Complete sequence: 5,959,964 bp
GenBank #: CP000712 (NC_009512)
REBASE acronym: PpuF1
Org_num: 4796
All begin Pput_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4610 | protein of unknown function DUF262 | |||
| 4611 | S | S.PpuSJTE1ORFAP (100% identity) | S.PpuF1ORF4612P | |
| 4612 | M | M.PpuSJTE1ORFAP (100% identity) | M.PpuF1ORF4612P | |
| 4613 | 277 aa hypothetical protein | |||
| 4614 | R | PpuSJTE1ORFAP (100% identity) | PpuF1ORF4612P | |
| 4615 | Non-specific serine/threonine protein kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1913 | inner membrane peptidase, Serine peptidase, | |||
| ??? | M | M.Ppu1760ORF16835P (69% identity) | M.PpuF1ORF1914P | |
| 1916 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4609 | 91 aa hypothetical protein | |||
| 4610 | R | PpuSJTE1GmrSDP (100% identity) | PpuF1GmrSDP | |
| 4611 | restriction modification system DNA specificity | |||
| 4618 | 730 aa hypothetical protein | |||
| 4619 | R | PpuSJTE1McrCP (100% identity) | PpuF1McrCP | |
| 4620 | R | PpuSJTE1McrBP (100% identity) | PpuF1McrBP | |
| 4621 | 226 aa hypothetical protein | |||