Pelotomaculum thermopropionicum SI |
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Putative Pelotomaculum thermopropionicum SI RM systems
Ref: Kosaka,T. et al. Genome Res. 18 (3), 442-448 (2008)
REBASE ref # 10126
Complete sequence: 3,025,375 bp
GenBank #: AP009389 (NC_009454)
REBASE acronym: PthS
Org_num: 4773
All begin PTH_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 720 | transposase and inactivated derivatives | |||
| 721 | R | 72 aa hypothetical protein | PthSORF721P | |
| 722 | 424 aa hypothetical protein | |||
| 723 | 777 aa hypothetical protein | |||
| ??? | restriction modification system DNA specificity subunit | |||
| ??? | M | type I restriction-modification system, M subunit | M.PthSORF721P | |
| 724 | 111 aa hypothetical protein | |||
| 2700 | 31 aa hypothetical protein | |||
| 2701 | R | 239 aa hypothetical protein | PthSORF2703P | |
| 2702 | M | M.Dsa435ORF5750P (37% identity) | M.PthSORF2703P | |
| 2703 | transposase and inactivated derivatives | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 714 | 285 aa hypothetical protein | |||
| 715 | M | M.Mre18860ORF5520P (72% identity) | M.PthSORF715P | |
| 716 | 937 aa hypothetical DNA/RNA helicase | |||
| 755 | 37 aa hypothetical protein | |||
| 756 | M | M.DthHORF253P (69% identity) | CGCG | M.PthSORF756P |
| 757 | 420 aa hypothetical membrane protein | |||
| 859 | 283 aa hypothetical protein | |||
| 860 | M | M.Zfok32ORFGP (62% identity) | M.PthSORF860P | |
| 861 | 410 aa hypothetical protein | |||
| 1122 | DNA-directed RNA polymerase, sigma subunit | |||
| 1123 | M | M.Aba57ORF15130P (60% identity) | GGNCC | M.PthSORF1123P |
| 1124 | R | Csp2560ORFAP (14% identity) | GGNCC | PthSORF1123P |
| 1125 | 502 aa hypothetical protein | |||
| 1935 | membrane carboxypeptidase | |||
| 1936 | M | M1.Dku6115ORF2479P (72% identity) | GGATC | M.PthSORF1936P |
| 1937 | 203 aa hypothetical protein | |||
| 2143 | 209 aa hypothetical membrane protein | |||
| 2144 | M | M.HcoHHORF1579P (52% identity) | AAGCTT | M.PthSORF2144P |
| 2145 | 133 aa hypothetical protein | |||
| 2403 | predicted ATPase | |||
| 2404 | M | M.PthSORF860P (75% identity) | M.PthSORF2404P | |
| 2405 | 344 aa hypothetical protein | |||
| 2666 | 350 aa hypothetical protein | |||
| 2667 | M | M.MthKAMORF7500P (58% identity) | CCCGGG | M.PthSORF2667P |
| 2668 | R | StpORF334P (29% identity) | CCCGGG | PthSORF2667P |
| 2669 | 465 aa hypothetical protein | |||
| 2694 | 250 aa hypothetical membrane protein | |||
| 2695 | M | M1.Dku6115ORF2479P (56% identity) | GGATC | M.PthSORF2695P |
| 2696 | 629 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 150 | 159 aa hypothetical protein | |||
| 151 | M | M1.TsyJLORFBP (73% identity) | M.PthSORF151P | |
| 152 | R | KmeB1ORF1829P (91% identity) | PthSORF151P | |
| 153 | 367 aa hypothetical protein | |||
| 215 | 129 aa hypothetical protein | |||
| 216 | M | M.NarCCL63ORFDP (16% identity) | M.PthSORF216P | |
| 217 | R | Cde4135ORF1508P (59% identity) | PthSORF216P | |
| 218 | uncharacterized conserved protein | |||
| 1522 | Uncharacterized protein conserved in bacteria | |||
| 1523 | M | M.DtuL3ORF1116P (77% identity) | M.PthSORF1523P | |
| 1524 | acyl-CoA dehydrogenases | |||