Flavobacterium branchiophilum FL-15 |
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Putative Flavobacterium branchiophilum FL-15 RM systems
Ref: Touchon,M. et al. Appl. Environ. Microbiol. (2011) In press
REBASE ref # 13538
Complete sequence: 3,559,884 bp
GenBank #: FQ859183
REBASE acronym: Fbr15
Org_num: 7768
All begin FBFL15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 817 | 229 aa Hypothetical protein | |||
| 818 | S | S.RanXG19ORF7365P (35% identity) | S.Fbr15ORF820P | |
| 819 | Transposase IS200/IS605 family | |||
| 820 | M | M.FpsR7ORF5900P (85% identity) | M.Fbr15ORF820P | |
| 821 | Probable transcriptional regulator | |||
| 1793 | Acetate--CoA ligase | |||
| 1794 | R | Fbr35035ORF10610P (96% identity) | Fbr15ORF1800P | |
| 1795 | 610 aa Hypothetical protein | |||
| 1796 | 427 aa Hypothetical protein | |||
| 1797 | S | S.Csp92008ORF7520P (55% identity) | S.Fbr15ORF1800P | |
| 1798 | 289 aa Hypothetical protein | |||
| 1799 | 113 aa Hypothetical protein | |||
| 1800 | M | M.Fbr35035ORF10610P (95% identity) | M.Fbr15ORF1800P | |
| 1802 | Bifunctional enzyme : 3,4-dihydroxy-2-butanone | |||
| 1958 | Protein of unknown function | |||
| 1959 | M | M.ZprORF879P (53% identity) | M.Fbr15ORF1959P | |
| 1960 | R | MpsM2ORF18135P (36% identity) | Fbr15ORF1959AP | |
| 1961 | Transposase IS110 family | |||
| 1962 | R | ZamAD3ORF28120P (33% identity) | Fbr15ORF1959BP | |
| 1963 | 343 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | Protein of unknown function | |||
| 121 | RM | OsiAW6ORFHP (19% identity) | Fbr15ORF121P | |
| 122 | ATP-dependent helicase | |||
| 163 | Protein of unknown function | |||
| 164 | R | Cpi21068ORF14965P (75% identity) | GCSGC | Fbr15ORF166P |
| 165 | Protein of unknown function | |||
| 166 | M | M.Fco20170ORF22080P (82% identity) | M.Fbr15ORF166P | |
| 167 | C | C.Fsp2A30ORF9650P (67% identity) | C.Fbr15ORF166P | |
| 168 | Protein of unknown function | |||
| 247 | Protein of unknown function | |||
| 248 | M | M.PinWW414ORF9365P (58% identity) | GAATTC | M.Fbr15ORF248P |
| 249 | Probable secreted exopolyphosphatase precursor | |||
| 469 | 139 aa Hypothetical protein | |||
| 470 | S | S.FpsFPG3ORF7895P (83% identity) | S.Fbr15ORF471P | |
| 471 | RM | FsspW15ORF7465P (88% identity) | Fbr15ORF471P | |
| 472 | Probable transmembrane protein of unknown | |||
| 672 | Fe-S assembly protein, SufD | |||
| 673 | RM | Fbr35035ORF10685P (66% identity) | Fbr15ORF673P | |
| 674 | Probable lipoprotein precursor | |||
| 835 | Protein of unknown function | |||
| 836 | R | Fbr35035ORF15810P (97% identity) | Fbr15ORF836P | |
| 837 | Probable type II modification methyltransferase | |||
| 836 | 369 aa Hypothetical protein | |||
| 837 | M | M.Fbr35035ORF15810P (97% identity) | M.Fbr15ORF837P | |
| 838 | Protein of unknown function | |||
| 1014 | Protein of unknown function | |||
| 1015 | RM | Fbr35035ORF13540P (81% identity) | Fbr15ORF1015P | |
| 1016 | Protein of unknown function | |||
| 1306 | Transposase IS5 family | |||
| 1307 | C | C.FpsF22ORF3975P (93% identity) | C.Fbr15ORF1308P | |
| 1308 | M | M.FspGS13ORF1985P (95% identity) | GATC | M.Fbr15ORF1308P |
| 1309 | R | FpsTRORFKP (94% identity) | GATC | Fbr15ORF1308P |
| 1310 | Protein of unknown function | |||
| 1545 | 152 aa Hypothetical protein | |||
| 1546 | RM | Fbr35035ORF14845P (67% identity) | Fbr15ORF1546P | |
| 1547 | 242 aa Hypothetical protein | |||
| 1931 | Probable TRNA-i(6)A37 modification enzyme MiaB | |||
| 1932 | R | Fbr35035ORF6890P (92% identity) | TCTAGA | Fbr15ORF1933P |
| 1933 | M | adenine-specific DNA methylase | TCTAGA | M.Fbr15ORF1933P |
| 1934 | Probable sigma-54-dependent transcriptional | |||
| 2131 | Bifunctional protein: pyrimidine operon | |||
| 2132 | R | Fbr35035ORF10875P (98% identity) | GTYRAC | Fbr15ORF2133P |
| 2133 | M | M.Fbr35035ORF10875P (98% identity) | GTYRAC | M.Fbr15ORF2133P |
| 2134 | Probable ribosome-associated heat shock protein | |||
| 2177 | 254 aa Hypothetical lipoprotein precursor | |||
| 2178 | RM | Cta4753ORF9085P (60% identity) | Fbr15ORF2178P | |
| 2179 | 120 aa Hypothetical protein. Putative transcriptional | |||
| 2287 | 400 aa Hypothetical protein | |||
| 2288 | RM | Fbr35035ORF85P (72% identity) | Fbr15ORF2288P | |
| 2289 | 238 aa Hypothetical protein | |||
| 2338 | Signal recognition particle protein | |||
| 2339 | M | M.Fbr15ORF837P (23% identity) | GGTGA | M.Fbr15ORF2339P |
| 2341 | type II modification methyltransferase | |||
| 2453 | 168 aa Hypothetical protein | |||
| 2454 | R | Fbr35035ORF9990P (75% identity) | GGCC | Fbr15ORF2451P |
| 2455 | Glycoside hydrolase precursor, family 53. | |||
| 2505 | Endonuclease/exonuclease/phosphatase precursor | |||
| 2506 | RM | Fbr35035ORF9250P (95% identity) | Fbr15ORF2506P | |
| 2507 | Probably involved in regulation of translation | |||
| 2509 | 201 aa Hypothetical protein | |||
| 2510 | RM | Fbr35035ORF9220P (73% identity) | Fbr15ORF2510P | |
| 2511 | Protein of unknown function, putative truncated | |||
| 2961 | Protein of unknown function | |||
| 2962 | R | Fbr35035ORF3605P (98% identity) | GGNCC | Fbr15ORF2963P |
| 2963 | M | M.Fbr35035ORF3605P (98% identity) | GGNCC | M.Fbr15ORF2963P |
| 2964 | 137 aa Hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 68 | Ferrochelatase | |||
| 69 | M | M.Fbr35035ORF7630P (94% identity) | M.Fbr15ORF69P | |
| 70 | R | Fbr35035ORF7630P (97% identity) | Fbr15ORF69P | |
| 71 | Probable transcriptional regulator, AraC family | |||
| 2692 | ATP-dependent DNA helicase PcrA | |||
| 2693 | R | Fsp83ORFAP (82% identity) | Fbr15ORF2694P | |
| 2694 | M | M.AspE75ORF9955P (68% identity) | M.Fbr15ORF2694P | |
| 2695 | 149 aa Hypothetical protein | |||