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Putative Shewanella putrefaciens CN-32 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10102
Complete sequence: 4,659,220 bp
GenBank #: CP000681 (NC_009438)
REBASE acronym: SpuCN
Org_num: 4761
All begin Sputcn32_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
153 | site-specific recombinase, phage integrase | |||
154 | M | M.VvuB2ORFDP (37% identity) | M.SpuCNORF154P | |
155 | AAA ATPase | |||
156 | protein of unknown function DUF45 | |||
157 | R | Spu681ORF2265P (100% identity) | SpuCNORF161P | |
158 | KAP P-loop domain protein | |||
159 | deoxyguanosinetriphosphate | |||
160 | S | S.Spu681ORF2265P (100% identity) | S.SpuCNORF161P | |
161 | M | M.Spu681ORF2265P (100% identity) | M.SpuCNORF161P | |
162 | 204 aa conserved hypothetical protein | |||
2907 | protein of unknown function UPF0150 | |||
2908 | M | M.Spu681ORF8725P (100% identity) | M.SpuCNORF2908P | |
2909 | S | S.Spu681ORF8725P (100% identity) | S.SpuCNORF2908P | |
2910 | ATPase associated with various cellular | |||
2911 | 435 aa conserved hypothetical protein | |||
2912 | R | Spu681ORF8725P (100% identity) | SpuCNORF2908P | |
2913 | transcriptional regulator, XRE family | |||
3522 | phage transcriptional regulator, AlpA | |||
3523 | R | Spu4MORF18250P (99% identity) | SpuCNORF3524P | |
3524 | M | M.Spu681ORF5580P (100% identity) | M.SpuCNORF3524P | |
3525 | S | S.Spu681ORF5580P (100% identity) | S.SpuCNORF3524P | |
3526 | 185 aa conserved hypothetical protein | |||
3980 | transcriptional regulator | |||
3981 | M | M1.Spu681ORF3210P (100% identity) | M1.SpuCNORF3981P | |
3982 | 209 aa conserved hypothetical protein | |||
3983 | transcriptional regulator | |||
3984 | M | M2.Spu681ORF3210P (100% identity) | M2.SpuCNORF3981P | |
3985 | S | S.Spu681ORF3210P (100% identity) | S.SpuCNORF3981P | |
3986 | R | Spu681ORF3210P (100% identity) | SpuCNORF3981P | |
3987 | 803 aa conserved hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3702 | 61 aa conserved hypothetical protein | |||
3703 | M | M.SspW3ORF3844P (100% identity) | GATC | M.SpuCNORF3703P |
3704 | Sporulation domain protein | |||
3925 | 183 aa hypothetical protein | |||
3926 | M | M.Spu681ORF3495P (92% identity) | M.SpuCNORF3926P | |
3927 | helix-turn-helix domain protein | |||
3938 | 515 aa hypothetical protein | |||
3939 | M | M.HseOs34ORFDP (47% identity) | M.SpuCNORF3939P | |
3940 | Integrase, catalytic region | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2909 | restriction modification system DNA specificity | |||
2910 | R | Spu681McrBP (100% identity) | SpuCNMcrBP | |
2911 | R | Spu681McrCP (99% identity) | SpuCNMcrCP | |
2912 | type I site-specific deoxyribonuclease, HsdR |