Rhodobacter sphaeroides ATCC 17025 |
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Putative Rhodobacter sphaeroides ATCC 17025 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10098
| Sequence length: | GenBank #: | |
| Chromosome: | 3,217,726 bp | CP000661 (NC_009428) |
| plasmid pRSPA01: | 877,879 bp | CP000662 (NC_009429) |
| plasmid pRSPA04: | 36,198 bp | CP000665 (NC_009432) |
REBASE acronym: Rsp17025
Org_num: 4757
All begin Rsph17025_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 938 | 48 aa hypothetical protein | |||
| 939 | R | 313 aa hypothetical protein | Rsp17025ORF939P | |
| 940 | 254 aa hypothetical protein | |||
| plasmid pRSPA01 | ||||
| 3532 | 129 aa hypothetical protein | |||
| 3533 | S | S.CazORI0ORF18720P (100% identity) | S.Rsp17025ORF3534P | |
| 3534 | M | M.CazORI0ORF18720P (100% identity) | M.Rsp17025ORF3534P | |
| 3535 | R | CazORI0ORF18720P (100% identity) | Rsp17025ORF3534P | |
| 3536 | 452 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 65 | alkane 1-monooxygenase | |||
| 66 | M | M.Rsp706ORF330P (99% identity) | GANTC | M.Rsp17025ORF66P |
| 67 | Ribonuclease H | |||
| 1287 | 103 aa hypothetical protein | |||
| 1288 | M | M.Rsp17025ORF2112P (100% identity) | GATC | M.Rsp17025ORF1288P |
| 1289 | 123 aa hypothetical protein | |||
| 1325 | D-isomer specific 2-hydroxyacid dehydrogenase, | |||
| 1326 | RM | RspKDORF2311P (82% identity) | Rsp17025ORF1326P | |
| 1327 | transposase, IS4 family | |||
| 2111 | 123 aa hypothetical protein | |||
| 2112 | M | M.Rsp17025ORF1288P (100% identity) | GATC | M.Rsp17025ORF2112P |
| 2113 | 103 aa hypothetical protein | |||
| plasmid pRSPA01 | ||||
| 3730 | 835 aa hypothetical protein | |||
| 3731 | RM | SspM15ORF36740P (63% identity) | Rsp17025ORF3731P | |
| 3732 | 166 aa hypothetical protein | |||
| plasmid pRSPA04 | ||||
| 4360 | 90 aa hypothetical protein | |||
| 4361 | RM | CazORI0ORF23755P (95% identity) | Rsp17025ORF4361P | |
| 4362 | 238 aa hypothetical protein | |||
| 4382 | Resolvase, N-terminal domain | |||
| 4383 | M | M.CazORI0ORF23890P (100% identity) | CTCGAG | M.Rsp17025ORF4383P |
| 4384 | 324 aa hypothetical protein | |||