Lactobacillus ruminis SPM0211 |
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Putative Lactobacillus ruminis SPM0211 RM systems
Ref: Lee,S. et al. unpublished
REBASE ref # 13369
Contig set: 2,172,227 bp
GenBank #: AFOJ00000000 (NZ_AFOJ00000000)
REBASE acronym: Lru211
Org_num: 7723
All begin LRU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 442 | 163 aa hypothetical protein | |||
| 443 | S | S1.PmeBin138ORFDP (42% identity) | S1.Lru211ORF446P | |
| 444 | integrase | |||
| 445 | S | S1.Lru211ORF446P (47% identity) | S2.Lru211ORF446P | |
| 446 | M | M.Lru25644ORF6590P (93% identity) | M.Lru211ORF446P | |
| 447 | R | Lru881ORF4120P (99% identity) | Lru211ORF446P | |
| 448 | ribosylpyrimidine nucleosidase | |||
| 888 | GMP synthase | |||
| 889 | M | M.Fnu1330ORF10850P (19% identity) | M.Lru211ORF889P | |
| 890 | 309 aa hypothetical protein | |||
| 1966 | 339 aa hypothetical protein | |||
| 1967 | M | M.EhaX29ORF9715P (40% identity) | M.Lru211ORF1967P | |
| 1968 | 564 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 334 | MATE family multi antimicrobial extrusion | |||
| 335 | RM | Lru881ORF4660P (93% identity) | Lru211ORF335P | |
| 336 | DNA or RNA helicase of superfamily ii | |||
| 335 | type III restriction protein res subunit | |||
| 336 | RM | M2.Lru881ORF4660P (98% identity) | Lru211ORF336P | |
| 337 | 331 aa hypothetical protein | |||
| 336 | DNA or RNA helicase of superfamily ii | |||
| 337 | RM | M1.Lru881ORF4660P (97% identity) | Lru211ORF337P | |
| 338 | HAD superfamily hydrolase | |||
| 1945 | 636 aa hypothetical protein | |||
| 1946 | RM | Lsa2DORF1950P (59% identity) | Lru211ORF1946P | |
| 1948 | 96 aa hypothetical protein | |||
| 2135 | 544 aa hypothetical protein | |||
| 2136 | M | M.LsaH1ORF8695P (60% identity) | M.Lru211ORF2136P | |
| 2137 | bacteriophage integrase | |||
| 2152 | 414 aa hypothetical protein | |||
| 2153 | R | type II site-specific deoxyribonuclease | GGNCC | Lru211ORF2153P |
| 2154 | 92 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 877 | oligopeptide ABC superfamily ATP binding | |||
| ??? | M | M.Lru25644ORF9830P (96% identity) | M.Lru211ORF878P | |
| 880 | R | Lru25644ORF9830P (97% identity) | Lru211ORF878P | |
| 881 | AraC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1889 | integral membrane protein | |||
| 1890 | R | LruORFAP (99% identity) | Lru211ORF1890P | |
| 1892 | hydrolase | |||