Lactobacillus salivarius GJ-24 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus salivarius GJ-24 RM systems
Ref: Cho,Y.-J. et al. unpublished
REBASE ref # 13363
GenBank #: AFOI00000000
REBASE acronym: LsaGJ24
Org_num: 7472
All begin LSGJ_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 101 | ornithine decarboxylase | |||
| 102 | S | S.LjoN31ORF8890P (39% identity) | S1.LsaGJ24ORF105P | |
| 103 | phage family integrase | |||
| 104 | S | S1.LsaC21ORF810P (40% identity) | S2.LsaGJ24ORF105P | |
| 105 | M | M.Lsacp400ORF1801P (98% identity) | M.LsaGJ24ORF105P | |
| 106 | S | S.Lpe20310ORFAP (50% identity) | S3.LsaGJ24ORF105P | |
| 107 | R | LsaSNK6ORF810P (98% identity) | LsaGJ24ORF105P | |
| 108 | type I restriction enzyme, methylase subunit | |||
| 655 | 109 aa hypothetical protein | |||
| 656 | M | M.Lsa840ORF332P (97% identity) | M.LsaGJ24ORF656P | |
| 657 | S | S.LsaRenORF1279P (65% identity) | S.LsaGJ24ORF656P | |
| 658 | R | LsaRenORF1279P (98% identity) | LsaGJ24ORF656P | |
| 659 | 200 aa hypothetical protein | |||
| 1045 | 54 aa hypothetical protein | |||
| 1046 | R | Lsacp400ORF20901P (99% identity) | LsaGJ24ORF1047P | |
| 1047 | M | M.LsaC21ORF4290P (99% identity) | M.LsaGJ24ORF1047P | |
| 1048 | S | S1.LsaDJORFAP (64% identity) | S1.LsaGJ24ORF1047P | |
| 1049 | site-specific recombinase, phage integrase | |||
| 1050 | S | S.LpaL1ORF15380P (54% identity) | S2.LsaGJ24ORF1047P | |
| 1051 | S | S3.LsaS01ORF4370P (90% identity) | S3.LsaGJ24ORF1047P | |
| 1052 | cellobiose PTS, EIIC | |||
| 1675 | oligopeptide ABC superfamily ATP binding | |||
| 1676 | R | LsaBNS11ORF9930P (99% identity) | LsaGJ24ORF1681P | |
| 1677 | S | S2.LsaBNS11ORF9930P (95% identity) | S1.LsaGJ24ORF1681P | |
| 1678 | S | S3.LsaBNS11ORF9930P (98% identity) | S2.LsaGJ24ORF1681P | |
| 1679 | phage integrase/recombinase | |||
| 1680 | S | S2.Lre84ORFBP (28% identity) | S3.LsaGJ24ORF1681P | |
| 1681 | M | M.LsaZLp4bORFIP (99% identity) | M1.LsaGJ24ORF1681P | |
| 1682 | M | M.LsaZLp4bORFHP (94% identity) | M2.LsaGJ24ORF1681P | |
| 1683 | S | S4.Lsa006ORF9830P (98% identity) | S4.LsaGJ24ORF1681P | |
| 1684 | membrane protein, toxin regulator | |||
| 1793 | type I restriction modification system protein | |||
| 1794 | M | M.LsaH1ORF770P (96% identity) | M.LsaGJ24ORF1794P | |
| 1795 | 46 aa hypothetical protein | |||
| 1871 | 58 aa hypothetical protein | |||
| 1872 | S | S.LsaSNK6ORF8335P (100% identity) | S.LsaGJ24ORF1872P | |
| 1873 | toxin-antitoxin system, toxin component, PIN | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1800 | DNA methylase | |||
| 1801 | RM | LsaZLp4bORFEBP (94% identity) | LsaGJ24ORF17801P | |
| 1802 | DEAD/DEAH box helicase family protein | |||
| 1798 | 238 aa hypothetical protein | |||
| 1799 | RM | Lsa2DORF8610AP (98% identity) | LsaGJ24ORF1799P | |
| 1800 | DNA methylase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | protein tyrosine phosphatase | |||
| 531 | R | LsaSGL03ORF410P (99% identity) | LsaGJ24ORF531P | |
| 532 | inositol-5-monophosphate dehydrogenase | |||
| 976 | 7,8-dihydro-8-oxoguanine-triphosphatase | |||
| ??? | R | Lsa210215ORF5550P (97% identity) | LsaGJ24ORFAP | |
| 981 | acetyltransferase, GNAT family | |||