Halophilic archaeon DL31 |
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Putative Halophilic archaeon DL31 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 28932
| Sequence length: | GenBank #: | |
| Chromosome: | 2,913,689 bp | CP002988 (NC_015954) |
| plasmid phalar01: | 705,810 bp | CP002989 (NC_015955) |
| plasmid phalar02: | 23,659 bp | CP002990 (NC_015959) |
REBASE acronym: HarDL31
Org_num: 7703
All begin Halar_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 863 | 85 aa hypothetical protein | |||
| 864 | R | HlaXH48ORF5810P (81% identity) | GACGTC | HarDL31ORF865P |
| 865 | M | M.HlaXH48ORF5810P (85% identity) | GACGTC | M.HarDL31ORF865P |
| 866 | transcription regulator | |||
| 1896 | threonine synthase | |||
| 1897 | RM | Hda313ORF17835P (8% identity) | HarDL31ORF1897P | |
| 1898 | ATPase associated with various cellular | |||
| 2141 | Subtilisin | |||
| 2142 | RM | HpeCDK2ORF282P (13% identity) | HarDL31ORF2142P | |
| 2143 | D-lactate dehydrogenase (cytochrome) | |||
| 3224 | pseudogene | |||
| 3225 | RM | HspL23ORF4950P (69% identity) | HarDL31ORF3225P | |
| 3226 | Geranylgeranylglyceryl phosphate synthase | |||
| plasmid phalar01 | ||||
| 47 | 210 aa hypothetical protein | |||
| 48 | M | M.HspZY10ORFDP (51% identity) | M.HarDL31ORF48P | |
| 49 | R | HspZY10ORFDP (85% identity) | HarDL31ORF48P | |
| 50 | Sigma-70 region 4 type 2 | |||
| 103 | transposase (ISH3) | |||
| 104 | RM | Hla49239ORF2856P (25% identity) | HarDL31ORF104P | |
| 105 | 1134 aa hypothetical protein | |||
| 104 | Type II restriction enzyme, methylase subunits | |||
| 105 | RM | Hsp1158ORF16480P (41% identity) | HarDL31ORF105P | |
| 106 | helicase domain-containing protein | |||
| 147 | 178 aa hypothetical protein | |||
| 148 | M | M.HspDL1ORF3670P (99% identity) | AGGCCT | M.HarDL31ORF148P |
| 149 | 93 aa hypothetical protein | |||
| 175 | integrase domain protein SAM domain protein | |||
| 176 | M | M.HspDLM4ORFEP (92% identity) | GTMKAC | M.HarDL31ORF176P |
| 177 | UvrD/REP helicase | |||
| 230 | transposase (ISH3) | |||
| 231 | RM | Hla49239ORF2856P (45% identity) | HarDL31ORF231P | |
| ??? | Type II restriction enzyme, methylase subunits | |||
| 231 | Type II restriction enzyme, methylase subunits | |||
| ??? | RM | NspMgORF2485P (47% identity) | HarDL31ORF232AP | |
| 233 | transposase IS66 | |||
| ??? | RM | Hsa3ORF12890P (27% identity) | HarDL31ORF232BP | |
| 234 | helicase domain-containing protein | |||
| 259 | 83 aa hypothetical protein | |||
| 260 | RM | HsaR1ORF5350P (71% identity) | HarDL31ORF260P | |
| 261 | 178 aa hypothetical protein | |||
| 386 | helicase domain-containing protein | |||
| 387 | M | M.Hra36ORF360P (77% identity) | M.HarDL31ORF387P | |
| 388 | 213 aa hypothetical protein | |||
| 498 | pseudogene | |||
| 500 | M | M.HspSJ27ORFAP (72% identity) | M.HarDL31ORF500P | |
| 501 | 111 aa hypothetical protein | |||
| 505 | 309 aa hypothetical protein | |||
| 506 | RM | HhaA6ORFDP (48% identity) | HarDL31ORF506P | |
| 507 | 350 aa hypothetical protein | |||
| 512 | helicase domain-containing protein | |||
| 513 | M | M.HspA56ORF23495P (84% identity) | M.HarDL31ORF513P | |
| 514 | 196 aa hypothetical protein | |||
| plasmid phalar02 | ||||
| 30 | 88 aa hypothetical protein | |||
| 31 | R | HspSVX81ORF457P (55% identity) | CTCGAG | HarDL31ORF31P |
| 1 | adenine-specific DNA methyltransferase | |||
| 31 | Type II site-specific deoxyribonuclease | |||
| 1 | M | M.HspCGA53ORFDP (60% identity) | CTCGAG | M.HarDL31ORF1P |
| 2 | 226 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3180 | DNA polymerase sliding clamp | |||
| 3181 | R | HvoDSMrrP (29% identity) | HarDL31MrrP | |
| 3182 | peptidase M29 aminopeptidase II | |||