Brachyspira intermedia PWS/A |
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Putative Brachyspira intermedia PWS/A RM systems
Ref: Hafstrom,T. et al. BMC Genomics 12 (1), 395 (2011)
REBASE ref # 13315
Complete sequence: 3,304,788 bp
GenBank #: CP002874
REBASE acronym: BinA
Org_num: 7678
All begin Bint_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | 857 aa hypothetical protein | |||
| 1811 | M | M.Bpi1145ORF2150P (92% identity) | M.BinAORF1811P | |
| 1812 | 262 aa hypothetical protein | |||
| 1813 | S | S.Bpi2904ORF1471P (38% identity) | S.BinAORF1811P | |
| 1814 | R | Bpi43ORF2210P (85% identity) | BinAORF1811P | |
| 1815 | 451 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 537 | isoleucyl-tRNA synthetase | |||
| 538 | RM | Bhy743ORF5375P (79% identity) | BinAORF538P | |
| 539 | 53 aa hypothetical protein | |||
| 638 | TM2 domain containing protein | |||
| 639 | M | M.Bhy9ORF4880P (96% identity) | M.BinAORF639P | |
| 640 | 1365 aa hypothetical protein | |||
| 660 | DPH oxidoreductase 1, D(P)H | |||
| 661 | M | M.Bhy9ORF4765P (43% identity) | CATG | M.BinAORF661P |
| 662 | 178 aa hypothetical protein | |||
| ??? | type III restriction-modification system: methylase | |||
| 804 | M | M.Bhy743ORF11840P (95% identity) | M.BinAORF804P | |
| 805 | bifunctional GMP synthase/glutamine | |||
| 1172 | aminoglycoside N(6)-acetyltransferase | |||
| 1173 | R | BhaNSH16ORF1485P (97% identity) | CTGCAG | BinAORF1174P |
| 1174 | Modification methylase | |||
| 1311 | NMT1/THI5 like domain protein | |||
| 1312 | M | M.Bhy1ORF540P (93% identity) | RAATTY | M.BinAORF1312P |
| 1313 | SCP-like extracellular protein | |||
| 1541 | 221 aa hypothetical protein | |||
| ??? | RM | DolHORF3141P (18% identity) | RM1.BinAORF1542P | |
| 1544 | 498 aa hypothetical protein | |||
| 2678 | dual specificity protein phosphatase | |||
| 2679 | M | M.Bpi1268ORF7270P (88% identity) | GCNGC | M.BinAORF2679P |
| 2680 | R | Bpi1268ORF7270P (78% identity) | GCNGC | BinAORF2679P |
| 2681 | V | V.Bpi1268ORF7270P (95% identity) | V.BinAORF2679P | |
| 2682 | riboflavin biosynthesis protein RibD | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 799 | 369 aa hypothetical protein | |||
| 800 | R | 905 aa hypothetical protein | BinAORF802P | |
| ??? | M | M.BhaNSH16ORF3005P (60% identity) | M.BinAORF802P | |
| 804 | DNA methylase N-4/N-6 domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 359 | tetrapyrrole (corrin/porphyrin) methylase | |||
| 360 | R | Bhy375MrrP (97% identity) | BinAMrrP | |
| 361 | SCP-like extracellular protein | |||
| 2694 | short-chain alcohol dehydrogenase | |||
| 2695 | R | BhaNSH16McrC3P (74% identity) | BinAMcrCP | |
| 2696 | R | Bpi1268McrBP (56% identity) | BinAMcrBP | |
| 2697 | extracellular solute-binding protein, family 3 | |||