Desulfotomaculum reducens MI-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Desulfotomaculum reducens MI-1 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10048
| Sequence length: | GenBank #: | |
| Chromosome: | 3,608,104 bp | CP000612 (NC_009253) |
| Chromosome: | 3,467,323 bp | AAOP00000000 (NZ_AAOP00000000) |
REBASE acronym: DreM
Org_num: 4730
All begin Dred_, DredDRAFT_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 863 | phage integrase domain protein SAM domain | |||
| 864 | M | M.Dgi7213ORF895P (82% identity) | CCCGGG | M.DreMORF864P |
| 865 | R | Dgi7213ORF895P (83% identity) | CCCGGG | DreMORF864P |
| 866 | transposase, IS204/IS1001/IS1096/IS1165 family | |||
| 877 | transposase, IS605 OrfB family | |||
| 878 | M | M.PmeBin87ORFCP (48% identity) | M.DreMORF878P | |
| 879 | 515 aa hypothetical protein | |||
| 1192 | helicase domain protein | |||
| 1193 | M | M.DspCB1ORF6060P (73% identity) | M.DreMORF1192P | |
| 1194 | 145 aa hypothetical protein | |||
| Chromosome | ||||
| 2216 | similar to Site-specific recombinase XerD | |||
| 2217 | M | M.Dgi7213ORF895P (82% identity) | CCCGGG | M.DreMORF864P |
| 2218 | R | Dgi7213ORF895P (83% identity) | CCCGGG | DreMORF864P |
| 2219 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 513 | helicase domain protein | |||
| 514 | M | M.Aur10aORF326P (39% identity) | M.DreMORF514P | |
| 515 | R | AfeGT2ORF4360P (63% identity) | DreMORF514P | |
| 516 | Radical SAM domain protein | |||
| 867 | integrase family protein | |||
| 868 | R | Rpa803ORF17765P (35% identity) | DreMORF868P | |
| 869 | M | M.MpsSph1ORF205P (68% identity) | M.DreMORF868P | |
| 870 | ATP-dependent endonuclease of the OLD | |||
| 2245 | 71 aa conserved hypothetical protein | |||
| 2246 | R | Aar15340ORF5475P (77% identity) | DreMORF2247P | |
| 2247 | DNA methylase N-4/N-6 domain protein | |||
| Chromosome | ||||
| 2219 | transposase | |||
| 2220 | R | Rpa803ORF17765P (35% identity) | DreMORF868P | |
| 2221 | M | M.MpsSph1ORF205P (68% identity) | M.DreMORF868P | |
| 2222 | similar to ATP-dependent endonuclease of the OLD | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24 | AAA ATPase | |||
| 25 | R | GsuYM18McrBP (24% identity) | DreMMcrBP | |
| 26 | R | SspNKC35McrCP (40% identity) | DreMMcrCP | |
| 27 | 325 aa hypothetical protein | |||