Desulfovibrio africanus Walvis Bay |
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Putative Desulfovibrio africanus Walvis Bay RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 13076
| Sequence length: | GenBank #: | |
| Chromosome: | 4,200,534 bp | CP003221 |
| Chromosome: | 4,200,529 bp | AFHE00000000 (NZ_AFHE00000000) |
REBASE acronym: DafWB
Org_num: 7363
All begin Desaf_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3446 | 282 aa hypothetical protein | |||
| 3447 | M | M.PaeIMP68ORF1365P (83% identity) | M.DafWBORFAP | |
| 3448 | S | S.Dla10312ORFDP (48% identity) | S.DafWBORFAP | |
| 3449 | FRG domain protein | |||
| 3450 | R | PspSOS3ORF1710P (78% identity) | DafWBORFAP | |
| 3451 | restriction endonuclease subunit S | |||
| 3450 | type I site-specific deoxyribonuclease, HsdR | |||
| 3451 | M | restriction endonuclease subunit S | M.DafWBORFBP | |
| 3452 | S | S1.Dol6ORF7365P (81% identity) | S.DafWBORFBP | |
| 3453 | restriction endonuclease | |||
| Chromosome | ||||
| ??? | M | M.PaeIMP68ORF1365P (83% identity) | M.DafWBORFAP | |
| ??? | S | S.Dla10312ORFDP (48% identity) | S.DafWBORFAP | |
| ??? | R | PspSOS3ORF1710P (78% identity) | DafWBORFAP | |
| ??? | restriction endonuclease | |||
| ??? | restriction endonuclease | |||
| ??? | M | Site-specific DNA-methyltransferase | M.DafWBORFBP | |
| ??? | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2532 | plasmid stabilization system | |||
| 2533 | M | M.PspSF6DndCP (48% identity) | M.DafWBDndCP | |
| 2534 | DNA sulfur modification protein DndD | |||
| 2533 | sulfurtransferase DndC | |||
| 2534 | M | M.Ssp106435DndDP (31% identity) | M.DafWBDndDP | |
| 2535 | DNA sulfur modification protein DndE | |||
| 2534 | DNA sulfur modification protein DndD | |||
| 2535 | M | M.RulUC8DndEP (37% identity) | M.DafWBDndEP | |
| 2536 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3450 | type I site-specific deoxyribonuclease, HsdR | |||
| ??? | R | restriction endonuclease | DafWBMrrP | |
| 3451 | restriction endonuclease subunit S | |||
| 3452 | protein of unknown function DUF1016 | |||
| 3453 | R | GbaFL17MrrP (55% identity) | DafWBMrr2P | |
| 3454 | 41 aa hypothetical protein | |||
| 3457 | 1739 aa hypothetical protein | |||
| 3458 | R | Sca3403MrrP (36% identity) | DafWBMrr3P | |
| 3459 | 716 aa hypothetical protein | |||
| Chromosome | ||||
| ??? | type I restriction component of type I restriction-modification system | |||
| ??? | R | restriction endonuclease | DafWBMrrP | |
| ??? | Site-specific DNA-methyltransferase | |||
| ??? | restriction endonuclease | |||
| ??? | R | GbaFL17MrrP (55% identity) | DafWBMrr2P | |
| ??? | R | Sca3403MrrP (36% identity) | DafWBMrr3P | |