Shewanella loihica PV-4 |
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Putative Shewanella loihica PV-4 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10043
Complete sequence: 4,602,594 bp
GenBank #: CP000606 (NC_009092)
REBASE acronym: SloPV
Org_num: 4727
All begin Shew_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 215 | Sporulation domain protein | |||
| 216 | M | M.SspCP20ORF19375P (98% identity) | GATC | M.SloPVDamP |
| 217 | 57 aa conserved hypothetical protein | |||
| 991 | Resolvase, N-terminal domain | |||
| 992 | R | PspS1ORF19355P (88% identity) | CTGCAG | SloPVORF933P |
| 993 | M | M.PspS1ORF19355P (85% identity) | CTGCAG | M.SloPVORF933P |
| 994 | KfrAs | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1259 | phage transcriptional regulator, AlpA | |||
| 1260 | M | M.Ave529ORF14950P (68% identity) | M.SloPVORF1260P | |
| 1261 | R | Ahy4AK4ORF2804P (91% identity) | SloPVORF1260P | |
| 1262 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3053 | Serine-type D-Ala-D-Ala carboxypeptidase | |||
| 3054 | R | SbaOSMrrP (54% identity) | SloPVMrrP | |
| 3055 | CMP/dCMP deaminase, zinc-binding | |||