Rhodobacter sphaeroides ATCC 17029 |
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Putative Rhodobacter sphaeroides ATCC 17029 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10013
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,147,721 bp | CP000577 (NC_009049) |
| chromosome 2: | 1,219,053 bp | CP000578 (NC_009050) |
REBASE acronym: Rsp17029
Org_num: 4717
All begin Rsph17029_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1856 | 218 aa hypothetical protein | |||
| 1857 | M | M.PenDW29ORF14550P (80% identity) | M.Rsp17029ORF1857P | |
| 1858 | S | S.Pal408IV (45% identity) | S.Rsp17029ORF1857P | |
| 1859 | R | PspTRPORFBP (79% identity) | Rsp17029ORF1857P | |
| 1860 | 221 aa hypothetical protein | |||
| chromosome 2 | ||||
| 3224 | 438 aa conserved hypothetical protein | |||
| 3225 | R | Rsp17025ORF3534P (98% identity) | Rsp17029ORF3226P | |
| 3226 | M | M.Rsp17025ORF3534P (97% identity) | M.Rsp17029ORF3226P | |
| 3227 | S | S.Rsu2351ORF876P (52% identity) | S.Rsp17029ORF3226P | |
| 3228 | 313 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 118 | alkane 1-monooxygenase | |||
| 119 | M | M.RspWS8NORF12765P (100% identity) | GANTC | M.Rsp17029ORF119P |
| 120 | Ribonuclease H | |||
| 652 | 68 aa hypothetical protein | |||
| 653 | M | M.PspSMMA5ORF3315P (57% identity) | M.Rsp17029ORF653P | |
| 654 | HNH endonuclease | |||
| 659 | protein of unknown function DUF1376 | |||
| 660 | M | M.RspBSW8ORF6165P (62% identity) | GATC | M.Rsp17029ORF660P |
| 661 | 202 aa hypothetical protein | |||
| 664 | helix-turn-helix domain protein | |||
| 665 | M | M.RspZRK36ORF9780P (45% identity) | M.Rsp17029ORF665P | |
| 666 | 407 aa hypothetical protein | |||
| 1845 | protein of unknown function DUF262 | |||
| 1846 | R | Pae19484aORF13950P (81% identity) | Rsp17029ORF1848P | |
| 1847 | 142 aa hypothetical protein | |||
| 1848 | M | M.SspHZN7ORF22020P (82% identity) | M.Rsp17029ORF1848P | |
| 1849 | 1098 aa hypothetical protein | |||
| chromosome 2 | ||||
| 3003 | phage late control D family protein | |||
| 3004 | M | M.RspAB29ORF18470P (79% identity) | M.Rsp17029ORF3004P | |
| 3005 | protein of unknown function DUF450 | |||
| 3375 | 165 aa hypothetical protein | |||
| 3376 | M | M.RspWS8NORF465P (98% identity) | M.Rsp17029ORF3376P | |
| 3377 | 269 aa conserved hypothetical protein | |||
| 3384 | (AF322013) ID483 (Bradyrhizobium | |||
| 3385 | V | V.Psp4604ORF470P (79% identity) | V.Rsp17029ORF3387P | |
| 3386 | R | Psp4604ORF470P (92% identity) | CCWGG | Rsp17029ORF3387P |
| 3387 | M | M.Psp4604ORF470P (91% identity) | CCWGG | M.Rsp17029ORF3387P |
| 3388 | DNA topology modulation kinase FlaR, putative | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 3191 | Integrase, catalytic region | |||
| 3192 | R | Rsp27ORFGP (89% identity) | Rsp17029ORF3192P | |
| 3193 | 156 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 3295 | 84 aa hypothetical protein | |||
| 3296 | M | M.RspHJORF21190P (98% identity) | CTSSAG | M.Rsp17029ORF3296P |
| 3297 | 219 aa conserved hypothetical protein | |||