Shewanella baltica OS155 |
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Putative Shewanella baltica OS155 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 10009
| Sequence length: | GenBank #: | |
| Chromosome: | 5,127,376 bp | CP000563 (NC_009052) |
| plasmid pSbal02: | 74,000 bp | CP000565 (NC_009036) |
REBASE acronym: SbaOS
Org_num: 4712
All begin Sbal_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 774 | GCN5-related N-acetyltransferase | |||
| 775 | R | Sba117ORF916P (100% identity) | SbaOSORF775P | |
| 776 | anticodon nuclease | |||
| 815 | anticodon nuclease | |||
| 816 | S | S.Sba117ORF916P (67% identity) | S.SbaOSORF821AP | |
| 817 | 166 aa conserved hypothetical protein | |||
| 818 | Integrase, catalytic region | |||
| 819 | S | S.Sba117ORF916P (31% identity) | S.SbaOSORF821BP | |
| 820 | protein of unknown function DUF1016 | |||
| 821 | M | M.Sba117ORF916P (100% identity) | M.SbaOSORF821P | |
| 822 | 164 aa conserved hypothetical protein | |||
| 3714 | IstB domain protein ATP-binding protein | |||
| 3715 | M | M.Sba117ORF3870P (100% identity) | M.SbaOSORF3715P | |
| 3716 | anticodon nuclease | |||
| 3717 | S | S.Sba117ORF3870P (100% identity) | S.SbaOSORF3715P | |
| 3718 | protein of unknown function DUF1016 | |||
| 3719 | R | Sba117ORF3870P (99% identity) | SbaOSORF3715P | |
| 3720 | phage integrase family protein | |||
| 4341 | 67 aa conserved hypothetical protein | |||
| 4342 | R | type I site-specific deoxyribonuclease, HsdR | SbaOSORF4349AP | |
| 4343 | Integrase, catalytic region | |||
| 4344 | IstB domain protein ATP-binding protein | |||
| 4345 | R | Sba117ORF4512P (85% identity) | SbaOSORF4349BP | |
| 4346 | 437 aa conserved hypothetical protein | |||
| 4347 | ATP-dependent DNA helicase RecQ | |||
| 4348 | S | S.Phe12003I (52% identity) | S.SbaOSORF4349P | |
| 4349 | M | N-6 DNA methylase | M.SbaOSORF4349AP | |
| 4350 | Integrase, catalytic region | |||
| 4351 | 166 aa conserved hypothetical protein | |||
| 4352 | M | M.Sba117ORF4512P (75% identity) | M.SbaOSORF4349BP | |
| 4353 | transcriptional regulator | |||
| plasmid pSbal02 | ||||
| 4457 | 313 aa conserved hypothetical protein | |||
| 4458 | M | M.Sba625ORF4127P (96% identity) | M.SbaOSORF4458P | |
| 4459 | Type I restriction-modification system specificity subunit | |||
| 4460 | Integrase, catalytic region | |||
| 4461 | transposase IS3/IS911 family protein | |||
| 4462 | S | S.Vch1126ORFAP (52% identity) | S.SbaOSORF4458P | |
| 4384 | R | Sba117ORF4813P (99% identity) | SbaOSORF4458P | |
| 4385 | transposase, Tn5 family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3616 | phage repressor | |||
| 3617 | M | M.AspXHORF13230P (82% identity) | GCTAGC | M.SbaOSORF3617P |
| 3618 | R | TspQ5ORF6075P (66% identity) | GCTAGC | SbaOSORF3617P |
| 3619 | 117 aa conserved hypothetical protein | |||
| 4109 | 61 aa conserved hypothetical protein | |||
| 4110 | M | M.Sba117ORF4266P (100% identity) | GATC | M.SbaOSORF4110P |
| 4111 | Sporulation domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1579 | Integrase, catalytic region | |||
| 1580 | M | M.Sba117ORF1690P (100% identity) | M.SbaOSORF1580P | |
| 1581 | mobile mystery protein B | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 636 | diguanylate cyclase | |||
| 637 | R | Sba117MrrP (99% identity) | SbaOSMrrP | |
| 638 | 81 aa conserved hypothetical protein | |||