Marinobacter aquaeolei VT8 |
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Putative Marinobacter aquaeolei VT8 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9940
| Sequence length: | GenBank #: | |
| Chromosome: | 4,326,849 bp | CP000514 (NC_008740) |
| plasmid pMAQU01: | 239,623 bp | CP000515 (NC_008738) |
| plasmid pMAQU02: | 213,290 bp | CP000516 (NC_008739) |
REBASE acronym: Maq
Org_num: 4681
All begin Maqu_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29 | 271 aa conserved hypothetical protein | |||
| 30 | S | S.MspC1S70ORF17330P (100% identity) | S.MaqORF31P | |
| 31 | M | M.MspC1S70ORF17330P (95% identity) | M.MaqORF31P | |
| 32 | S-type Pyocin domain protein | |||
| 33 | Barstar (barnase inhibitor) | |||
| ??? | R | MspC1S70ORF17330P (98% identity) | MaqORF31P | |
| 35 | 250 aa hypothetical protein | |||
| 229 | KAP P-loop domain protein | |||
| 230 | R | MspJH2ORF33810P (95% identity) | MaqORF234P | |
| 231 | 275 aa hypothetical protein | |||
| 232 | 313 aa conserved hypothetical protein | |||
| 233 | S | S.MspC18ORF17730P (62% identity) | S.MaqORF234P | |
| 234 | M | M.MspCP1ORF13585P (97% identity) | M.MaqORF234P | |
| 235 | Resolvase, N-terminal domain | |||
| 412 | restriction modification system DNA specificity | |||
| 413 | M | M.MspJH2ORF33810P (98% identity) | M.MaqORF412P | |
| 414 | S | S.Psh10360I (53% identity) | S.MaqORF412P | |
| 415 | R | MaqORF234P (94% identity) | MaqORF412P | |
| 416 | 271 aa hypothetical protein | |||
| 2388 | RNAse R | |||
| 2389 | M | M.MspC1S70ORF13435P (96% identity) | M.MaqORF2389P | |
| 2390 | transposase, IS4 family | |||
| 2391 | S | S.PfaYLCF04ORFDP (45% identity) | S.MaqORF2389P | |
| 2392 | R | Msp042ORF3458P (97% identity) | MaqORF2389P | |
| 2393 | protein of unknown function DUF45 | |||
| 3379 | 113 aa hypothetical protein | |||
| 3380 | M | M.MspC1S70ORF4315P (99% identity) | M.MaqORF3380P | |
| 3381 | filamentation induced by cAMP protein Fic | |||
| 3382 | S | S.Hlu23508ORFCP (47% identity) | S.MaqORF3380P | |
| 3383 | restriction endonuclease | |||
| 3384 | 188 aa conserved hypothetical protein | |||
| 3385 | DNA binding domain, excisionase family | |||
| 3386 | R | Hhy15725ORF8070P (91% identity) | MaqORF3380P | |
| 3387 | DegP2 peptidase, Serine peptidase, MEROPS family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 560 | 460 aa conserved hypothetical protein | |||
| 561 | RM | MspES1ORF9775P (72% identity) | MaqORF561P | |
| 562 | 370 aa conserved hypothetical protein | |||
| 1314 | helicase domain protein | |||
| 1315 | RM | Ath21654ORF14090AP (22% identity) | MaqORF1315P | |
| 1316 | protein of unknown function DUF1524 RloF | |||
| 1713 | Alcohol dehydrogenase GroES domain protein | |||
| 1714 | R | PaePALA55ORF1189P (52% identity) | GGCGCC | MaqORF1714P |
| 1715 | V | V.NarIP (69% identity) | V.MaqORF1714P | |
| 1716 | 78 aa conserved hypothetical protein | |||
| plasmid pMAQU01 | ||||
| 4155 | 266 aa hypothetical protein | |||
| 4156 | RM | DcaCE14ORF5295P (72% identity) | CRTTGAC | MaqI |
| 4157 | 207 aa hypothetical protein | |||
| 4298 | 129 aa hypothetical protein | |||
| 4299 | M | M.MsaSMR5ORF4151P (69% identity) | CCNGG | M.MaqORF4299P |
| 4300 | 261 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pMAQU01 | ||||
| 4238 | 136 aa hypothetical protein | |||
| 4239 | R | MaqORF4077P (95% identity) | MaqORF4240P | |
| 4240 | M | M.MaqORF4077P (63% identity) | M.MaqORF4240P | |
| 4241 | 178 aa hypothetical protein | |||
| plasmid pMAQU02 | ||||
| 4076 | pseudogene | |||
| 4077 | M | M.HqaXH36ORF16300P (63% identity) | M.MaqORF4077P | |
| 4078 | R | MaqORF4240P (95% identity) | MaqORF4077P | |
| 4079 | 209 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1316 | R | PasTeo6GmrSDP (47% identity) | MaqGmrSDP | |
| 1317 | 388 aa hypothetical protein | |||
| 1909 | Methyltransferase type 11 | |||
| 1910 | R | MspP4B1ORF7270P (97% identity) | MaqORF1910P | |
| 1911 | 159 aa conserved hypothetical protein | |||
| 3382 | restriction modification system DNA specificity | |||
| 3383 | R | Hhy15725MrrP (95% identity) | MaqMrrP | |
| 3384 | 188 aa conserved hypothetical protein | |||