Treponema caldaria DSM 7334 |
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Putative Treponema caldaria DSM 7334 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 18701
Complete sequence: 3,239,340 bp
GenBank #: CP002868 (NC_015732)
REBASE acronym: Tca7334
Org_num: 7270
All begin Spica_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2694 | nucleotidyltransferase substrate binding | |||
| 2695 | R | HspKM1WORFCP (70% identity) | GATANNNNNNTGC | Tca7334IP |
| 2696 | 62 aa hypothetical protein | |||
| 2697 | S | S.MmaGORF2198P (49% identity) | GATANNNNNNTGC | S.Tca7334I |
| 2698 | 62 aa hypothetical protein | |||
| 2699 | 34 aa hypothetical protein | |||
| 2700 | 51 aa hypothetical protein | |||
| 2701 | 37 aa hypothetical protein | |||
| 2702 | M | M.BspCF50ORF384P (78% identity) | GATANNNNNNTGC | M.Tca7334I |
| 2703 | YcfA family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 83 | response regulator receiver protein | |||
| 84 | M | M.TbaRmG11ORF9385P (58% identity) | RAATTY | M.Tca7334II |
| 85 | pullulanase, type I | |||
| 1763 | 442 aa hypothetical protein | |||
| 1764 | M | M.Vvu054ORF3314P (46% identity) | M.Tca7334ORF1764P | |
| 1765 | prevent-host-death family protein | |||
| 2080 | SMC domain protein | |||
| 2081 | M | M.DspBuS5ORF3961P (54% identity) | M.Tca7334ORF2081P | |
| 2083 | ATPase AAA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 100 | PilT protein domain protein | |||
| 101 | R | DspTolMORF6635P (87% identity) | GCCAT | Tca7334IIIP |
| 102 | M | M.Dre12DCAORF10540P (45% identity) | GCCAT | M.Tca7334III |
| 103 | 203 aa hypothetical protein | |||
| 2458 | dienelactone hydrolase | |||
| 2459 | M | M.AspHS1ORFCP (66% identity) | M.Tca7334ORF2459P | |
| 2460 | transposase IS204/IS1001/IS1096/IS1165 family | |||
| 2461 | R | Msp72103ORF11795P (48% identity) | Tca7334ORF2459P | |
| 2462 | 302 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | integron integrase | |||
| 1731 | R | Tca7334Mrr3P (100% identity) | Tca7334MrrP | |
| 1732 | 139 aa hypothetical protein | |||
| 1752 | 380 aa hypothetical protein | |||
| 1753 | restriction endonuclease | |||
| 1757 | TfoX domain-containing protein | |||
| 1758 | R | Tca7334MrrP (100% identity) | Tca7334Mrr3P | |
| 1759 | 267 aa hypothetical protein | |||