Pseudomonas stutzeri ATCC 17588 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas stutzeri ATCC 17588 RM systems
Ref: Yan,Y. et al. unpublished
REBASE ref # 13589
Complete sequence: 4,547,930 bp
GenBank #: CP002881 (NC_015740)
REBASE acronym: Pst17588
Org_num: 7274
All begin PSTAB_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4 | DNA gyrase subunit B | |||
| 5 | M | M.Pst875ORF11385AP (100% identity) | M.Pst17588ORF5AP | |
| 6 | transposase IS3/IS911 family protein | |||
| 7 | ISPsy21, transposase orfB | |||
| 8 | M | M.Pst875ORF11385BP (95% identity) | M.Pst17588ORF5BP | |
| 9 | transposase | |||
| 133 | transposase | |||
| 134 | M | type I restriction-modification system | M.Pst17588ORF134P | |
| 135 | S | S.Pst875ORF12035P (100% identity) | S.Pst17588ORF134P | |
| 136 | 41 aa hypothetical protein | |||
| 283 | restriction endonuclease | |||
| ??? | S | S1.Pst875ORF12745P (77% identity) | S.Pst17588ORF286P | |
| 286 | M | M.Pst875ORF12745P (100% identity) | M.Pst17588ORF286P | |
| 287 | 162 aa hypothetical protein | |||
| 288 | abortive infection protein | |||
| 289 | R | Pst442ORF1140P (99% identity) | Pst17588ORF286P | |
| 290 | SAM-dependent methyltransferase | |||
| 3392 | 42 aa hypothetical protein | |||
| 3393 | R | Pst875ORF7280P (100% identity) | Pst17588ORF3398P | |
| 3394 | DNA/RNA helicase | |||
| 3395 | McrBC 5-methylcytosine restriction system | |||
| 3396 | GTPase subunit of restriction endonuclease-like | |||
| 3397 | S | S.Pst875ORF7305P (100% identity) | S.Pst17588ORF3398P | |
| 3398 | M | M.Pps5344III (98% identity) | M.Pst17588ORF3398P | |
| 3399 | 235 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2255 | 943 aa hypothetical protein | |||
| 2256 | M | M.Pst875ORF1550P (96% identity) | M.Pst17588ORF2256P | |
| 2257 | Type III restriction enzyme, res subunit family | |||
| 2777 | yecA family protein | |||
| 2778 | RM | Pst14405ORFCAP (38% identity) | Pst17588ORF2778P | |
| 2779 | 998 aa hypothetical protein | |||
| 2781 | 539 aa hypothetical protein | |||
| 2782 | RM | Pba1013ORF19240P (85% identity) | Pst17588ORF2782P | |
| 2783 | filamentation induced by cAMP protein Fic | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1204 | 875 aa conserved hypothetical protein | |||
| 1205 | R | Pst875ORF17380P (100% identity) | Pst17588ORF1206P | |
| 1206 | M | M.Pst875ORF17380P (100% identity) | M.Pst17588ORF1206P | |
| 1207 | peptidase S8 and S53 subtilisin kexin sedolisin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 282 | 140 aa hypothetical protein | |||
| 283 | R | Pst875MrrP (100% identity) | Pst17588MrrP | |
| 284 | type I restriction-modification system, S | |||
| 1544 | LysR family transcriptional regulator | |||
| 1545 | R | Pst875Mrr2P (100% identity) | Pst17588Mrr2P | |
| 1546 | deoxyguanosinetriphosphate | |||
| 3394 | DNA/RNA helicase | |||
| 3395 | R | Pst875McrCP (99% identity) | Pst17588McrCP | |
| 3396 | R | Pst875McrBP (100% identity) | Pst17588McrBP | |
| 3397 | restriction modification system DNA specificity | |||